| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q9Y7Y3 | 233 | YGR4_SCHPO Uncharacterized RNA-binding protei... | 146 | 7e-22 | 97.1 | 43 | 58 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042254; P:ribosome biogenesis; ISS:PomBase. | 2 | Q07623 | 225 | NOP6_YEAST Nucleolar protein 6 OS=Saccharomyc... | 116 | 4e-16 | 80.5 | 40 | 57 | GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0019843; F:rRNA binding; IDA:SGD. | | | | | | | | | | GO:0042274; P:ribosomal small subunit biogenesis; IGI:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 3 | P23588 | 611 | IF4B_HUMAN Eukaryotic translation initiation ... | 53 | 0.00001 | 51.2 | 40 | 55 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0016281; C:eukaryotic translation initiation factor 4F complex; TAS:ProtInc. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; TAS:ProtInc. | | | | | | | | | | GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.::GO:0006446; P:regulation of translational initiation; TAS:ProtInc. | 4 | Q8BGD9 | 611 | IF4B_MOUSE Eukaryotic translation initiation ... | 53 | 0.00002 | 50.1 | 38 | 55 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 5 | Q09100 | 369 | RNP24_SCHPO RNA-binding protein rnp24 OS=Schi... | 88 | 0.00007 | 48.1 | 34 | 55 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:PomBase. | | | | | | | | | | GO:0006364; P:rRNA processing; ISS:PomBase. | 6 | P48810 | 385 | RB87F_DROME Heterogeneous nuclear ribonucleop... | 86 | 0.002 | 43.9 | 35 | 56 | GO:0000785; C:chromatin; IDA:FlyBase.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0035062; C:omega speckle; IDA:FlyBase.::GO:0005703; C:polytene chromosome puff; IDA:FlyBase.::GO:0030529; C:ribonucleoprotein complex; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase. | | | | | | | | | | GO:0007067; P:mitosis; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 7 | Q02926 | 471 | RB97D_DROME Ribonucleoprotein RB97D OS=Drosop... | 63 | 0.008 | 42 | 43 | 56 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007286; P:spermatid development; IMP:FlyBase. | 8 | P07909 | 365 | ROA1_DROME Heterogeneous nuclear ribonucleopr... | 53 | 3.6 | 33.5 | 30 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005703; C:polytene chromosome puff; IDA:FlyBase.::GO:0030529; C:ribonucleoprotein complex; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase. | | | | | | | | | | GO:0033119; P:negative regulation of RNA splicing; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 9 | Q9WUK2 | 248 | IF4H_MOUSE Eukaryotic translation initiation ... | 132 | 0.014 | 40.4 | 23 | 43 | GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 10 | Q5XI72 | 248 | IF4H_RAT Eukaryotic translation initiation fa... | 60 | 0.016 | 40.4 | 32 | 53 | GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 11 | Q15056 | 248 | IF4H_HUMAN Eukaryotic translation initiation ... | 128 | 0.016 | 40.4 | 23 | 45 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0016281; C:eukaryotic translation initiation factor 4F complex; TAS:ProtInc.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; TAS:ProtInc. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006446; P:regulation of translational initiation; TAS:ProtInc. | 12 | Q5M9F1 | 428 | RBM34_RAT RNA-binding protein 34 OS=Rattus no... | 70 | 0.018 | 40.8 | 37 | 50 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 13 | Q1JPH6 | 228 | IF4H_BOVIN Eukaryotic translation initiation ... | 60 | 0.023 | 39.7 | 32 | 53 | GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 14 | Q5RBR8 | 228 | IF4H_PONAB Eukaryotic translation initiation ... | 60 | 0.025 | 39.7 | 32 | 53 | GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 15 | P37838 | 685 | NOP4_YEAST Nucleolar protein 4 OS=Saccharomyc... | 99 | 7.1 | 32.7 | 26 | 43 | GO:0005730; C:nucleolus; TAS:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; TAS:SGD. | 16 | Q8C5L7 | 375 | RBM34_MOUSE RNA-binding protein 34 OS=Mus mus... | 70 | 0.034 | 39.7 | 37 | 50 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 17 | P53883 | 403 | NOP13_YEAST Nucleolar protein 13 OS=Saccharom... | 51 | 0.04 | 39.7 | 33 | 57 | GO:0005730; C:nucleolus; IDA:SGD.::GO:0030684; C:preribosome; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 18 | O14327 | 166 | PAB2_SCHPO Polyadenylate-binding protein 2 OS... | 58 | 0.058 | 37.7 | 33 | 57 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:PomBase.::GO:0005515; F:protein binding; IPI:PomBase. | | | | | | | | | | GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IMP:PomBase. | 19 | Q8BIQ5 | 580 | CSTF2_MOUSE Cleavage stimulation factor subun... | 66 | 0.066 | 38.9 | 32 | 55 | GO:0071920; C:cleavage body; ISS:UniProtKB.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 20 | Q8HXM1 | 572 | CSTF2_BOVIN Cleavage stimulation factor subun... | 66 | 0.073 | 38.9 | 32 | 55 | GO:0071920; C:cleavage body; ISS:UniProtKB.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 21 | O94248 | 4717 | MDN1_SCHPO Midasin OS=Schizosaccharomyces pom... | 261 | 2.5 | 34.3 | 21 | 39 | GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase. | | | | | | | | | | GO:0005524; F:ATP binding; IC:PomBase.::GO:0016887; F:ATPase activity; ISS:PomBase. | | | | | | | | | | GO:0006461; P:protein complex assembly; IEA:InterPro.::GO:0000027; P:ribosomal large subunit assembly; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:PomBase. | 22 | Q85WU2 | 2046 | YCF1_PINKO Putative protein ycf1 OS=Pinus kor... | 208 | 0.08 | 38.9 | 24 | 46 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 23 | P33240 | 577 | CSTF2_HUMAN Cleavage stimulation factor subun... | 66 | 0.082 | 38.9 | 32 | 55 | GO:0071920; C:cleavage body; IDA:UniProtKB.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0006379; P:mRNA cleavage; TAS:ProtInc.::GO:0006378; P:mRNA polyadenylation; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 24 | Q5RDA3 | 577 | CSTF2_PONAB Cleavage stimulation factor subun... | 66 | 0.085 | 38.5 | 32 | 55 | GO:0071920; C:cleavage body; ISS:UniProtKB.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 25 | Q05152 | 2339 | CAC1B_RABIT Voltage-dependent N-type calcium ... | 228 | 0.091 | 38.9 | 23 | 35 | GO:0009986; C:cell surface; IDA:UniProtKB.::GO:0005891; C:voltage-gated calcium channel complex; IDA:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0005245; F:voltage-gated calcium channel activity; IEA:InterPro. | | | | | | | | | | | 26 | O89086 | 153 | RBM3_MOUSE Putative RNA-binding protein 3 OS=... | 49 | 0.094 | 37 | 35 | 53 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0043023; F:ribosomal large subunit binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0035196; P:production of miRNAs involved in gene silencing by miRNA; IDA:MGI.::GO:0009409; P:response to cold; IDA:MGI.::GO:0006412; P:translation; IDA:MGI. | 27 | P98179 | 157 | RBM3_HUMAN Putative RNA-binding protein 3 OS=... | 49 | 0.14 | 36.6 | 35 | 53 | GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0045727; P:positive regulation of translation; ISS:UniProtKB. | 28 | Q925G0 | 155 | RBM3_RAT Putative RNA-binding protein 3 OS=Ra... | 49 | 0.14 | 36.6 | 35 | 53 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0030425; C:dendrite; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045727; P:positive regulation of translation; IDA:UniProtKB. | 29 | Q98SJ2 | 360 | DAZP1_XENLA DAZ-associated protein 1 OS=Xenop... | 63 | 0.15 | 37.7 | 29 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW. | 30 | P20397 | 651 | NUCL_XENLA Nucleolin OS=Xenopus laevis (Afric... | 81 | 0.15 | 38.1 | 27 | 54 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 31 | Q8IID4 | 5251 | DYHC2_PLAF7 Dynein heavy chain-like protein P... | 164 | 0.6 | 36.2 | 26 | 41 | GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0003777; F:microtubule motor activity; ISS:UniProtKB. | | | | | | | | | | GO:0007018; P:microtubule-based movement; ISS:UniProtKB. |
