rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
61 | P10979 | 157 | GRPA_MAIZE Glycine-rich RNA-binding, abscisic... | 78 | 0.002 | 41.6 | 31 | 54 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006950; P:response to stress; IEA:UniProtKB-KW. | 62 | Q9PTX2 | 164 | CIRBP_LITCT Cold-inducible RNA-binding protei... | 79 | 0.001 | 42.7 | 28 | 54 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0019899; F:enzyme binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0016477; P:cell migration; ISS:UniProtKB.::GO:0007369; P:gastrulation; ISS:UniProtKB.::GO:0042750; P:hibernation; IEP:UniProtKB.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0022008; P:neurogenesis; ISS:UniProtKB.::GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0048793; P:pronephros development; ISS:UniProtKB.::GO:0009409; P:response to cold; ISS:UniProtKB. | 63 | Q66J99 | 190 | RBM18_XENLA Probable RNA-binding protein 18 O... | 92 | 0.00001 | 48.5 | 35 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 64 | Q9BRL6 | 282 | SRSF8_HUMAN Serine/arginine-rich splicing fac... | 100 | 3.7 | 32.7 | 30 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 65 | Q42404 | 427 | RU17_ARATH U1 small nuclear ribonucleoprotein... | 150 | 0.27 | 36.6 | 25 | 40 | GO:0005634; C:nucleus; IDA:TAIR.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:TAIR. | 66 | P15771 | 694 | NUCL_CHICK Nucleolin OS=Gallus gallus (Chicke... | 79 | 0.05 | 39.3 | 29 | 56 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 67 | Q13310 | 644 | PABP4_HUMAN Polyadenylate-binding protein 4 O... | 251 | 0.056 | 38.9 | 25 | 43 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:MGI.::GO:0008266; F:poly(U) RNA binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0007596; P:blood coagulation; TAS:ProtInc.::GO:0006401; P:RNA catabolic process; TAS:ProtInc.::GO:0006396; P:RNA processing; TAS:ProtInc.::GO:0006412; P:translation; TAS:ProtInc. | 68 | P39697 | 212 | RT19_ARATH 40S ribosomal protein S19, mitocho... | 92 | 0.014 | 40 | 29 | 48 | GO:0005763; C:mitochondrial small ribosomal subunit; IDA:TAIR. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; NAS:TAIR. | 69 | Q99070 | 168 | GRP2_SORBI Glycine-rich RNA-binding protein 2... | 77 | 0.024 | 38.9 | 29 | 52 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 70 | Q44554 | 103 | RBPB_NOSS1 Putative RNA-binding protein rbpB ... | 84 | 0.0005 | 42.7 | 33 | 49 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 71 | Q3B7L6 | 345 | SRSF6_BOVIN Serine/arginine-rich splicing fac... | 78 | 0.00003 | 48.9 | 36 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 72 | Q9WX39 | 105 | RBPF_NOSS1 Putative RNA-binding protein rbpF ... | 79 | 0.00003 | 46.2 | 33 | 54 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 73 | O89086 | 153 | RBM3_MOUSE Putative RNA-binding protein 3 OS=... | 88 | 0.00004 | 46.6 | 28 | 50 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0043023; F:ribosomal large subunit binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0035196; P:production of miRNAs involved in gene silencing by miRNA; IDA:MGI.::GO:0009409; P:response to cold; IDA:MGI.::GO:0006412; P:translation; IDA:MGI. | 74 | P19683 | 315 | ROC4_NICSY 31 kDa ribonucleoprotein, chloropl... | 88 | 1.2 | 34.7 | 30 | 47 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 75 | Q4WK03 | 753 | PABP_ASPFU Polyadenylate-binding protein, cyt... | 38 | 1.4 | 34.7 | 39 | 63 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 76 | P19684 | 324 | ROC5_NICSY 33 kDa ribonucleoprotein, chloropl... | 88 | 0.034 | 39.3 | 28 | 48 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 77 | Q9Y4C8 | 960 | RBM19_HUMAN Probable RNA-binding protein 19 O... | 89 | 0.23 | 37 | 29 | 45 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0040019; P:positive regulation of embryonic development; ISS:UniProtKB. | 78 | A1D4K4 | 751 | PABP_NEOFI Polyadenylate-binding protein, cyt... | 38 | 1.3 | 34.7 | 39 | 63 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 79 | Q80YR5 | 991 | SAFB2_MOUSE Scaffold attachment factor B2 OS=... | 92 | 0.00007 | 48.5 | 35 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 80 | Q499V6 | 217 | ZCRB1_RAT Zinc finger CCHC-type and RNA-bindi... | 95 | 0.00007 | 47 | 28 | 46 | GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 81 | O93235 | 166 | CIRBA_XENLA Cold-inducible RNA-binding protei... | 79 | 0.003 | 41.2 | 28 | 54 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0019899; F:enzyme binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0070181; F:SSU rRNA binding; ISS:UniProtKB.::GO:0030371; F:translation repressor activity; ISS:UniProtKB. | | | | | | | | | | GO:0016477; P:cell migration; IMP:UniProtKB.::GO:0007369; P:gastrulation; IMP:UniProtKB.::GO:0072004; P:kidney field specification; IMP:UniProtKB.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0022008; P:neurogenesis; IMP:UniProtKB.::GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0048793; P:pronephros development; IMP:UniProtKB.::GO:0009409; P:response to cold; IEP:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0034063; P:stress granule assembly; ISS:UniProtKB. | 82 | Q44560 | 102 | RBPA_NOSS1 Putative RNA-binding protein rbpA ... | 89 | 0.24 | 34.7 | 29 | 47 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 83 | Q9CZ96 | 217 | ZCRB1_MOUSE Zinc finger CCHC-type and RNA-bin... | 95 | 0.00007 | 47 | 28 | 46 | GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005689; C:U12-type spliceosomal complex; ISS:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 84 | P43607 | 289 | RRT5_YEAST Regulator of rDNA transcription pr... | 85 | 0.015 | 40.4 | 29 | 45 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 85 | A7A270 | 289 | RRT5_YEAS7 Regulator of rDNA transcription pr... | 85 | 0.015 | 40.4 | 29 | 45 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 86 | B5VI57 | 289 | RRT5_YEAS6 Regulator of rDNA transcription pr... | 85 | 0.015 | 40.4 | 29 | 45 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 87 | C7GYD5 | 289 | RRT5_YEAS2 Regulator of rDNA transcription pr... | 85 | 0.015 | 40.4 | 29 | 45 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 88 | B3LUP1 | 289 | RRT5_YEAS1 Regulator of rDNA transcription pr... | 85 | 0.015 | 40.4 | 29 | 45 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 89 | Q0CR95 | 753 | PABP_ASPTN Polyadenylate-binding protein, cyt... | 38 | 0.92 | 35 | 42 | 63 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 90 | Q23120 | 281 | RSP2_CAEEL Probable splicing factor, arginine... | 98 | 0.00008 | 47.4 | 30 | 49 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0007506; P:gonadal mesoderm development; IEA:UniProtKB-KW.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IGI:UniProtKB.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0008380; P:RNA splicing; NAS:UniProtKB.::GO:0007283; P:spermatogenesis; IGI:UniProtKB. | 91 | Q5R6W3 | 190 | RBM18_PONAB Probable RNA-binding protein 18 O... | 92 | 0.00008 | 46.6 | 35 | 50 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | |