rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P32529 | 125 | RPA12_YEAST DNA-directed RNA polymerase I sub... | 125 | 4e-21 | 87 | 39 | 59 | GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006363; P:termination of RNA polymerase I transcription; IMP:SGD.::GO:0042790; P:transcription of nuclear large rRNA transcript from RNA polymerase I promoter; IGI:SGD. | 2 | O94703 | 119 | RPA12_SCHPO DNA-directed RNA polymerase I sub... | 122 | 6e-20 | 84 | 39 | 58 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; IGI:PomBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006360; P:transcription from RNA polymerase I promoter; IGI:PomBase.::GO:0006353; P:transcription termination, DNA-dependent; IGI:PomBase. | 3 | Q56254 | 110 | RPOM_THECE DNA-directed RNA polymerase subuni... | 118 | 0.000000002 | 55.1 | 34 | 47 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 4 | Q07271 | 111 | RPOM_SULAC DNA-directed RNA polymerase subuni... | 127 | 0.00000002 | 52.8 | 33 | 43 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 5 | Q04307 | 110 | RPC10_YEAST DNA-directed RNA polymerase III s... | 131 | 0.00000002 | 52 | 31 | 43 | GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006386; P:termination of RNA polymerase III transcription; IMP:SGD.::GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IMP:SGD. | 6 | Q58548 | 108 | RPOM_METJA DNA-directed RNA polymerase subuni... | 114 | 0.00000007 | 50.8 | 30 | 42 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 7 | Q6MFY5 | 123 | RPA12_RAT DNA-directed RNA polymerase I subun... | 109 | 0.00000009 | 50.4 | 31 | 49 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 8 | Q5TM50 | 126 | RPA12_MACMU DNA-directed RNA polymerase I sub... | 109 | 0.0000001 | 50.1 | 32 | 48 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 9 | Q1XHV8 | 126 | RPA12_PANTR DNA-directed RNA polymerase I sub... | 108 | 0.0000002 | 49.3 | 32 | 48 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 10 | Q9P1U0 | 126 | RPA12_HUMAN DNA-directed RNA polymerase I sub... | 108 | 0.0000002 | 49.3 | 32 | 48 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 11 | Q9Y2Y1 | 108 | RPC10_HUMAN DNA-directed RNA polymerase III s... | 118 | 0.0000004 | 48.5 | 30 | 42 | GO:0005666; C:DNA-directed RNA polymerase III complex; TAS:ProtInc. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome. | 12 | Q9CQZ7 | 108 | RPC10_MOUSE DNA-directed RNA polymerase III s... | 118 | 0.0000005 | 48.1 | 30 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW. | 13 | Q791N7 | 123 | RPA12_MOUSE DNA-directed RNA polymerase I sub... | 109 | 0.0000007 | 48.1 | 30 | 49 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 14 | Q1RMP0 | 123 | RPA12_BOVIN DNA-directed RNA polymerase I sub... | 109 | 0.000002 | 46.6 | 30 | 46 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 15 | Q2M2S7 | 108 | RPC10_BOVIN DNA-directed RNA polymerase III s... | 116 | 0.000002 | 46.2 | 29 | 41 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW. | 16 | Q32P73 | 125 | RPB9_BOVIN DNA-directed RNA polymerase II sub... | 123 | 0.000006 | 45.1 | 27 | 41 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 17 | P60899 | 125 | RPB9_PIG DNA-directed RNA polymerase II subun... | 117 | 0.00001 | 44.7 | 27 | 42 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 18 | P60898 | 125 | RPB9_MOUSE DNA-directed RNA polymerase II sub... | 117 | 0.00001 | 44.7 | 27 | 42 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 19 | P36954 | 125 | RPB9_HUMAN DNA-directed RNA polymerase II sub... | 117 | 0.00001 | 44.7 | 27 | 42 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; TAS:ProtInc. | | | | | | | | | | GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 20 | Q4KLL0 | 301 | TCEA1_RAT Transcription elongation factor A p... | 64 | 0.00002 | 45.8 | 39 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 21 | P10711 | 301 | TCEA1_MOUSE Transcription elongation factor A... | 64 | 0.00002 | 45.8 | 39 | 58 | GO:0005654; C:nucleoplasm; IDA:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030218; P:erythrocyte differentiation; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 22 | P23193 | 301 | TCEA1_HUMAN Transcription elongation factor A... | 64 | 0.00002 | 45.8 | 39 | 58 | GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 23 | Q29RL9 | 301 | TCEA1_BOVIN Transcription elongation factor A... | 64 | 0.00002 | 45.8 | 39 | 58 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 24 | P07273 | 309 | TFS2_YEAST Transcription elongation factor S-... | 69 | 0.00002 | 45.8 | 36 | 57 | GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0001139; F:core RNA polymerase II recruiting transcription factor activity; IMP:SGD.::GO:0000993; F:RNA polymerase II core binding; IPI:SGD.::GO:0001012; F:RNA polymerase II regulatory region DNA binding; IDA:SGD.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0001193; P:maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter; IMP:SGD.::GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0045899; P:positive regulation of RNA polymerase II transcriptional preinitiation complex assembly; IMP:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0031440; P:regulation of mRNA 3'-end processing; IMP:SGD.::GO:0031564; P:transcription antitermination; IDA:SGD.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; IDA:SGD.::GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IMP:SGD. | 25 | P36958 | 129 | RPB9_DROME DNA-directed RNA polymerase II sub... | 118 | 0.0001 | 42 | 24 | 43 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:FlyBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007067; P:mitosis; IMP:FlyBase.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:FlyBase. | 26 | Q63799 | 299 | TCEA2_RAT Transcription elongation factor A p... | 100 | 0.0001 | 43.5 | 29 | 50 | GO:0005634; C:nucleus; TAS:RGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:RGD.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 27 | Q15560 | 299 | TCEA2_HUMAN Transcription elongation factor A... | 56 | 0.0001 | 43.5 | 39 | 57 | GO:0008023; C:transcription elongation factor complex; NAS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; NAS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; NAS:UniProtKB. | 28 | Q9QVN7 | 299 | TCEA2_MOUSE Transcription elongation factor A... | 100 | 0.0001 | 43.5 | 29 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 29 | Q148K0 | 300 | TCEA2_BOVIN Transcription elongation factor A... | 56 | 0.0001 | 43.5 | 39 | 57 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 30 | O29033 | 103 | RPOM_ARCFU DNA-directed RNA polymerase subuni... | 116 | 0.0001 | 41.2 | 25 | 43 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 31 | P52652 | 308 | TFS2_CAEEL Putative transcription elongation ... | 36 | 0.0005 | 41.6 | 50 | 67 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. |