rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q6BZX4 | 467 | TFB2_YARLI RNA polymerase II transcription fa... | 486 | 9e-129 | 389 | 44 | 62 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 2 | Q6BGW8 | 515 | TFB2_DEBHA RNA polymerase II transcription fa... | 515 | 3e-125 | 382 | 41 | 60 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 3 | Q6CLR2 | 496 | TFB2_KLULA RNA polymerase II transcription fa... | 496 | 8e-117 | 359 | 42 | 61 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 4 | Q75B51 | 514 | TFB2_ASHGO RNA polymerase II transcription fa... | 510 | 5e-116 | 358 | 42 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 5 | Q6FP41 | 504 | TFB2_CANGA RNA polymerase II transcription fa... | 514 | 7e-113 | 350 | 40 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 6 | P87303 | 447 | TFB2_SCHPO RNA polymerase II transcription fa... | 470 | 4e-109 | 338 | 40 | 60 | GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0005675; C:holo TFIIH complex; ISS:PomBase.::GO:0000112; C:nucleotide-excision repair factor 3 complex; ISS:PomBase. | | | | | | | | | | GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase. | | | | | | | | | | GO:0000717; P:nucleotide-excision repair, DNA duplex unwinding; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISS:PomBase. | 7 | Q02939 | 513 | TFB2_YEAST RNA polymerase II transcription fa... | 528 | 2e-108 | 338 | 40 | 58 | GO:0000439; C:core TFIIH complex; IDA:SGD.::GO:0005675; C:holo TFIIH complex; IDA:SGD.::GO:0000112; C:nucleotide-excision repair factor 3 complex; IPI:SGD. | | | | | | | | | | GO:0003690; F:double-stranded DNA binding; IDA:SGD. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IMP:SGD.::GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IDA:SGD.::GO:0006366; P:transcription from RNA polymerase II promoter; IDA:SGD. | 8 | O70422 | 463 | TF2H4_MOUSE General transcription factor IIH ... | 494 | 3e-88 | 284 | 36 | 55 | GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 9 | P60027 | 462 | TF2H4_PANTR General transcription factor IIH ... | 494 | 6e-88 | 283 | 36 | 55 | GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 10 | Q92759 | 462 | TF2H4_HUMAN General transcription factor IIH ... | 494 | 6e-88 | 283 | 36 | 55 | GO:0005675; C:holo TFIIH complex; IDA:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc. | | | | | | | | | | GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 11 | Q54C29 | 483 | TF2H4_DICDI General transcription factor IIH ... | 491 | 3e-55 | 197 | 31 | 50 | GO:0005675; C:holo TFIIH complex; ISS:dictyBase. | | | | | | | | | | | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; ISS:dictyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:dictyBase. | 12 | A4X5I0 | 652 | NHAA3_SALTO Na(+)/H(+) antiporter nhaA 3 OS=S... | 42 | 1.4 | 35.4 | 38 | 62 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0015297; F:antiporter activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006885; P:regulation of pH; IEA:InterPro.::GO:0006814; P:sodium ion transport; IEA:UniProtKB-KW. | 13 | A8LVS8 | 652 | NHAA1_SALAI Na(+)/H(+) antiporter nhaA 1 OS=S... | 42 | 2.6 | 34.3 | 36 | 62 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0015297; F:antiporter activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006885; P:regulation of pH; IEA:InterPro.::GO:0006814; P:sodium ion transport; IEA:UniProtKB-KW. |