rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | Q6DD06 | 426 | ZC3HF_XENLA Zinc finger CCCH domain-containin... | 36 | 0.22 | 38.5 | 56 | 69 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 32 | Q6GLD9 | 418 | MKRN2_XENTR Probable E3 ubiquitin-protein lig... | 51 | 0.22 | 38.5 | 39 | 53 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0009798; P:axis specification; ISS:BHF-UCL.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0050768; P:negative regulation of neurogenesis; ISS:UniProtKB.::GO:0014065; P:phosphatidylinositol 3-kinase cascade; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0043491; P:protein kinase B signaling cascade; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; ISS:UniProtKB. | 33 | Q9DD48 | 423 | MKRN2_SERQU Probable E3 ubiquitin-protein lig... | 51 | 0.25 | 38.1 | 39 | 53 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 34 | Q0DA50 | 665 | C3H45_ORYSJ Zinc finger CCCH domain-containin... | 46 | 0.28 | 38.1 | 30 | 46 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 35 | Q5H7N8 | 429 | ZC3HF_CHICK Zinc finger CCCH domain-containin... | 36 | 0.29 | 38.1 | 56 | 69 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 36 | Q02799 | 301 | LEE1_YEAST Zinc finger protein LEE1 OS=Saccha... | 27 | 0.82 | 36.2 | 52 | 70 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 37 | B0F0H3 | 409 | MKRN2_XENLA Probable E3 ubiquitin-protein lig... | 51 | 0.32 | 37.7 | 37 | 55 | GO:0005622; C:intracellular; IC:UniProtKB. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0009798; P:axis specification; IMP:BHF-UCL.::GO:0009790; P:embryo development; IMP:UniProtKB.::GO:0050768; P:negative regulation of neurogenesis; IMP:UniProtKB.::GO:0014065; P:phosphatidylinositol 3-kinase cascade; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0043491; P:protein kinase B signaling cascade; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IDA:UniProtKB. | 38 | Q803J8 | 433 | ZC3HF_DANRE Zinc finger CCCH domain-containin... | 25 | 0.32 | 37.7 | 64 | 76 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 39 | A9LNK9 | 631 | CPSF_ARATH Cleavage and polyadenylation speci... | 46 | 0.32 | 38.1 | 33 | 46 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0005516; F:calmodulin binding; IDA:TAIR.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IDA:TAIR.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 40 | Q9DFG8 | 414 | MKRN2_DANRE Probable E3 ubiquitin-protein lig... | 51 | 0.4 | 37.4 | 39 | 53 | GO:0005622; C:intracellular; ISS:UniProtKB. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 41 | Q8BQZ5 | 211 | CPSF4_MOUSE Cleavage and polyadenylation spec... | 59 | 0.51 | 36.6 | 32 | 42 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 42 | Q5FVR7 | 243 | CPSF4_RAT Cleavage and polyadenylation specif... | 59 | 0.6 | 36.6 | 32 | 42 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 43 | Q5NU13 | 402 | MKRN2_TAKRU Probable E3 ubiquitin-protein lig... | 51 | 0.61 | 37 | 37 | 55 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 44 | O19137 | 243 | CPSF4_BOVIN Cleavage and polyadenylation spec... | 59 | 0.63 | 36.6 | 32 | 42 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 45 | A4IGY3 | 426 | ZC3HF_XENTR Zinc finger CCCH domain-containin... | 36 | 0.65 | 37 | 53 | 69 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 46 | Q6AT25 | 493 | C3H34_ORYSJ Zinc finger CCCH domain-containin... | 64 | 0.8 | 36.6 | 31 | 47 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 47 | Q1EHT7 | 1007 | C3H4_ORYSJ Zinc finger CCCH domain-containing... | 65 | 1.3 | 36.2 | 35 | 49 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 48 | Q2YAC5 | 807 | PHK_NITMU Probable phosphoketolase OS=Nitroso... | 75 | 1.3 | 36.2 | 33 | 47 | | | | | | | | | | | GO:0016832; F:aldehyde-lyase activity; IEA:InterPro. | | | | | | | | | | GO:0005975; P:carbohydrate metabolic process; IEA:InterPro. | 49 | Q0J952 | 711 | C3H32_ORYSJ Zinc finger CCCH domain-containin... | 71 | 1.5 | 35.8 | 31 | 44 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 50 | B1W0A6 | 271 | ATPD_STRGG ATP synthase subunit delta OS=Stre... | 144 | 2.4 | 34.7 | 24 | 40 | GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW. | | | | | | | | | | GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro. | | | | | | | | | | GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro. | 51 | Q6S9E0 | 325 | TTP_SHEEP Tristetraprolin OS=Ovis aries (Shee... | 61 | 3 | 34.7 | 33 | 51 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0071889; F:14-3-3 protein binding; ISS:UniProtKB.::GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:UniProtKB.::GO:0006402; P:mRNA catabolic process; ISS:UniProtKB.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006950; P:response to stress; ISS:UniProtKB. | 52 | P26651 | 326 | TTP_HUMAN Tristetraprolin OS=Homo sapiens (Hu... | 61 | 3 | 34.7 | 30 | 48 | GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0005829; C:cytosol; IDA:MGI.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0071889; F:14-3-3 protein binding; IDA:UniProtKB.::GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0019957; F:C-C chemokine binding; IPI:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; IDA:MGI.::GO:0019901; F:protein kinase binding; IPI:UniProtKB.::GO:0003727; F:single-stranded RNA binding; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0070935; P:3'-UTR-mediated mRNA stabilization; IDA:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; IDA:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; IDA:UniProtKB.::GO:0006950; P:response to stress; IDA:UniProtKB. | 53 | Q13064 | 507 | MKRN3_HUMAN Probable E3 ubiquitin-protein lig... | 43 | 4.2 | 34.3 | 33 | 53 | GO:0030529; C:ribonucleoprotein complex; TAS:ProtInc. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 54 | P53781 | 324 | TTP_BOVIN Tristetraprolin OS=Bos taurus (Bovi... | 61 | 4.8 | 33.9 | 33 | 51 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0071889; F:14-3-3 protein binding; ISS:UniProtKB.::GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:UniProtKB.::GO:0006402; P:mRNA catabolic process; ISS:UniProtKB.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006950; P:response to stress; ISS:UniProtKB. | 55 | Q84W91 | 468 | C3H32_ARATH Zinc finger CCCH domain-containin... | 118 | 6 | 33.9 | 26 | 37 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 56 | Q0JD07 | 346 | C3H28_ORYSJ Zinc finger CCCH domain-containin... | 65 | 6.9 | 33.5 | 31 | 46 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 57 | O95639 | 269 | CPSF4_HUMAN Cleavage and polyadenylation spec... | 54 | 7 | 33.1 | 33 | 44 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0046778; P:modification by virus of host mRNA processing; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0019058; P:viral infectious cycle; TAS:Reactome. | 58 | Q6P5D3 | 1388 | DHX57_MOUSE Putative ATP-dependent RNA helica... | 32 | 7.5 | 33.9 | 44 | 59 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 59 | Q7Z3H4 | 446 | SAMD7_HUMAN Sterile alpha motif domain-contai... | 84 | 8.1 | 33.5 | 27 | 43 | | | | | | | | | | | | | | | | | | | | | | 60 | Q6DJP7 | 269 | CPSF4_XENLA Cleavage and polyadenylation spec... | 54 | 8.3 | 33.1 | 33 | 44 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 61 | P22893 | 319 | TTP_MOUSE Tristetraprolin OS=Mus musculus (Mo... | 62 | 9 | 33.1 | 27 | 47 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005829; C:cytosol; IDA:MGI.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0071889; F:14-3-3 protein binding; ISS:UniProtKB.::GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:UniProtKB.::GO:0007243; P:intracellular protein kinase cascade; IDA:MGI.::GO:0050728; P:negative regulation of inflammatory response; IMP:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IDA:MGI.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006950; P:response to stress; ISS:UniProtKB.::GO:0050779; P:RNA destabilization; IMP:MGI. |