rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
61 | O75382 | 744 | TRIM3_HUMAN Tripartite motif-containing prote... | 49 | 0.001 | 45.4 | 37 | 53 | GO:0005769; C:early endosome; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008022; F:protein C-terminus binding; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007399; P:nervous system development; TAS:ProtInc.::GO:0015031; P:protein transport; IEA:UniProtKB-KW. | 62 | Q96F44 | 468 | TRI11_HUMAN E3 ubiquitin-protein ligase TRIM1... | 53 | 0.001 | 45.1 | 40 | 51 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0009615; P:response to virus; IEA:UniProtKB-KW. | 63 | P15918 | 1043 | RAG1_HUMAN V(D)J recombination-activating pro... | 44 | 0.001 | 45.4 | 41 | 59 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0004519; F:endonuclease activity; ISS:UniProtKB.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; ISS:UniProtKB. | | | | | | | | | | GO:0010390; P:histone monoubiquitination; ISS:UniProtKB.::GO:0006955; P:immune response; TAS:ProtInc.::GO:0002331; P:pre-B cell allelic exclusion; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0033077; P:T cell differentiation in thymus; ISS:UniProtKB.::GO:0033151; P:V(D)J recombination; ISS:UniProtKB. | 64 | Q5D7I2 | 494 | TRIM5_PITPI Tripartite motif-containing prote... | 73 | 0.001 | 45.1 | 33 | 51 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 65 | Q4KLN8 | 487 | RNF8_RAT E3 ubiquitin-protein ligase RNF8 OS=... | 45 | 0.001 | 45.1 | 31 | 58 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0030496; C:midbody; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB. | | | | | | | | | | GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0033522; P:histone H2A ubiquitination; ISS:UniProtKB.::GO:0033523; P:histone H2B ubiquitination; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0045739; P:positive regulation of DNA repair; ISS:UniProtKB.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB. | 66 | Q96T88 | 793 | UHRF1_HUMAN E3 ubiquitin-protein ligase UHRF1... | 56 | 0.001 | 45.1 | 36 | 52 | GO:0005634; C:nucleus; IDA:BHF-UCL. | | | | | | | | | | GO:0000987; F:core promoter proximal region sequence-specific DNA binding; IDA:BHF-UCL.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008327; F:methyl-CpG binding; IDA:UniProtKB.::GO:0035064; F:methylated histone residue binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0008283; P:cell proliferation; IEP:BHF-UCL.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0032270; P:positive regulation of cellular protein metabolic process; IDA:BHF-UCL.::GO:2000373; P:positive regulation of DNA topoisomerase (ATP-hydrolyzing) activity; IC:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IC:BHF-UCL.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 67 | Q9R1R2 | 744 | TRIM3_MOUSE Tripartite motif-containing prote... | 49 | 0.001 | 45.1 | 37 | 53 | GO:0005769; C:early endosome; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005515; F:protein binding; IPI:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0015031; P:protein transport; IEA:UniProtKB-KW. | 68 | Q5ACW2 | 216 | CWC24_CANAL Pre-mRNA-splicing factor CWC24 OS... | 67 | 0.001 | 43.9 | 33 | 46 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 69 | O70277 | 744 | TRIM3_RAT Tripartite motif-containing protein... | 49 | 0.001 | 45.1 | 37 | 53 | GO:0005769; C:early endosome; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005515; F:protein binding; IPI:RGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0015031; P:protein transport; IEA:UniProtKB-KW. | 70 | A0JN74 | 468 | TRI11_BOVIN E3 ubiquitin-protein ligase TRIM1... | 85 | 0.001 | 44.7 | 33 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0009615; P:response to virus; IEA:UniProtKB-KW. | 71 | Q8IZP6 | 322 | R113B_HUMAN RING finger protein 113B OS=Homo ... | 49 | 0.001 | 44.3 | 31 | 49 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 72 | Q6J1I7 | 237 | RN166_RAT RING finger protein 166 OS=Rattus n... | 54 | 0.001 | 43.9 | 43 | 57 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 73 | Q3U9F6 | 237 | RN166_MOUSE RING finger protein 166 OS=Mus mu... | 54 | 0.001 | 43.9 | 43 | 57 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 74 | Q867B5 | 1043 | RAG1_PIG V(D)J recombination-activating prote... | 43 | 0.001 | 44.7 | 42 | 58 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0004519; F:endonuclease activity; ISS:UniProtKB.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; ISS:UniProtKB. | | | | | | | | | | GO:0010390; P:histone monoubiquitination; ISS:UniProtKB.::GO:0002331; P:pre-B cell allelic exclusion; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0033077; P:T cell differentiation in thymus; ISS:UniProtKB.::GO:0033151; P:V(D)J recombination; ISS:UniProtKB. | 75 | P34088 | 1042 | RAG1_RABIT V(D)J recombination-activating pro... | 44 | 0.002 | 44.7 | 41 | 59 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0004519; F:endonuclease activity; ISS:UniProtKB.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; ISS:UniProtKB. | | | | | | | | | | GO:0010390; P:histone monoubiquitination; ISS:UniProtKB.::GO:0002331; P:pre-B cell allelic exclusion; ISS:UniProtKB.::GO:0051865; P:protein autoubiquitination; ISS:UniProtKB.::GO:0033077; P:T cell differentiation in thymus; ISS:UniProtKB.::GO:0033151; P:V(D)J recombination; ISS:UniProtKB. | 76 | Q5XI70 | 351 | PCGF6_RAT Polycomb group RING finger protein ... | 66 | 0.002 | 44.3 | 32 | 45 | GO:0035102; C:PRC1 complex; ISS:UniProtKB. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 77 | Q99NA9 | 353 | PCGF6_MOUSE Polycomb group RING finger protei... | 51 | 0.002 | 44.3 | 37 | 51 | GO:0035102; C:PRC1 complex; ISS:UniProtKB. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 78 | Q9P3U8 | 468 | YJ95_SCHPO Uncharacterized RING finger protei... | 62 | 0.002 | 44.3 | 29 | 45 | GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0034080; P:CenH3-containing nucleosome assembly at centromere; ISS:PomBase.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase. | 79 | Q5D7H7 | 547 | TRIM5_LAGLA Tripartite motif-containing prote... | 65 | 0.002 | 44.3 | 35 | 49 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 80 | Q8VDF2 | 782 | UHRF1_MOUSE E3 ubiquitin-protein ligase UHRF1... | 49 | 0.002 | 44.3 | 39 | 55 | GO:0000792; C:heterochromatin; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0008283; P:cell proliferation; TAS:MGI.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 81 | Q8N9V2 | 468 | TRIML_HUMAN Probable E3 ubiquitin-protein lig... | 84 | 0.002 | 43.9 | 30 | 46 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW. | 82 | Q4P400 | 355 | CWC24_USTMA Pre-mRNA-splicing factor CWC24 OS... | 40 | 0.002 | 43.9 | 35 | 58 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 83 | Q5D7I1 | 547 | TRIM5_ATEGE Tripartite motif-containing prote... | 65 | 0.002 | 43.9 | 34 | 51 | GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 84 | A4IF63 | 744 | TRIM2_BOVIN Tripartite motif-containing prote... | 101 | 0.002 | 44.3 | 25 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0043526; P:neuroprotection; ISS:UniProtKB. | 85 | Q7TPK1 | 774 | UHRF1_RAT E3 ubiquitin-protein ligase UHRF1 O... | 49 | 0.002 | 43.9 | 39 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042393; F:histone binding; IEA:InterPro.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 86 | Q9ESN6 | 744 | TRIM2_MOUSE Tripartite motif-containing prote... | 52 | 0.003 | 43.9 | 35 | 58 | GO:0005737; C:cytoplasm; NAS:UniProtKB. | | | | | | | | | | GO:0017022; F:myosin binding; NAS:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; NAS:UniProtKB. | | | | | | | | | | GO:0043526; P:neuroprotection; IMP:UniProtKB. | 87 | D3ZQG6 | 744 | TRIM2_RAT Tripartite motif-containing protein... | 52 | 0.003 | 43.9 | 35 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0043526; P:neuroprotection; IMP:UniProtKB. | 88 | F7H9X2 | 744 | TRIM2_CALJA Tripartite motif-containing prote... | 52 | 0.003 | 43.9 | 35 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0043526; P:neuroprotection; ISS:UniProtKB. | 89 | Q9C040 | 744 | TRIM2_HUMAN Tripartite motif-containing prote... | 52 | 0.003 | 43.9 | 35 | 58 | GO:0005737; C:cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; NAS:UniProtKB. | | | | | | | | | | GO:0043526; P:neuroprotection; ISS:UniProtKB. | 90 | D2GXS7 | 744 | TRIM2_AILME Tripartite motif-containing prote... | 52 | 0.003 | 43.9 | 35 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0043526; P:neuroprotection; ISS:UniProtKB. | 91 | Q4WUA0 | 339 | CWC24_ASPFU Pre-mRNA-splicing factor cwc24 OS... | 42 | 0.003 | 43.5 | 38 | 50 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |