rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
151 | Q6FXP4 | 861 | MRD1_CANGA Multiple RNA-binding domain-contai... | 96 | 3 | 33.1 | 26 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 152 | Q6Z1C0 | 572 | NUCL1_ORYSJ Nucleolin 1 OS=Oryza sativa subsp... | 111 | 0.000007 | 50.8 | 26 | 49 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 153 | Q28IQ9 | 166 | CIRBP_XENTR Cold-inducible RNA-binding protei... | 73 | 0.000003 | 50.1 | 32 | 53 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0019899; F:enzyme binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0016477; P:cell migration; ISS:UniProtKB.::GO:0007369; P:gastrulation; ISS:UniProtKB.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0022008; P:neurogenesis; ISS:UniProtKB.::GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0048793; P:pronephros development; ISS:UniProtKB.::GO:0009409; P:response to cold; ISS:UniProtKB. | 154 | P26378 | 380 | ELAV4_HUMAN ELAV-like protein 4 OS=Homo sapie... | 62 | 0.16 | 37 | 34 | 50 | | | | | | | | | | | GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; TAS:ProtInc. | 155 | Q5RBU8 | 353 | ROA2_PONAB Heterogeneous nuclear ribonucleopr... | 74 | 0.09 | 37.7 | 31 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 156 | P51992 | 385 | RO32_XENLA Heterogeneous nuclear ribonucleopr... | 80 | 0.12 | 37.4 | 31 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 157 | P17130 | 365 | ROA1_XENLA Heterogeneous nuclear ribonucleopr... | 61 | 0.39 | 35.8 | 34 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 158 | Q61701 | 385 | ELAV4_MOUSE ELAV-like protein 4 OS=Mus muscul... | 62 | 0.16 | 37 | 34 | 50 | | | | | | | | | | | GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 159 | O09032 | 373 | ELAV4_RAT ELAV-like protein 4 OS=Rattus norve... | 62 | 0.16 | 37 | 34 | 50 | | | | | | | | | | | GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 160 | O88569 | 353 | ROA2_MOUSE Heterogeneous nuclear ribonucleopr... | 74 | 0.095 | 37.7 | 31 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; ISS:HGNC.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0097157; F:pre-mRNA intronic binding; IDA:MGI.::GO:0043047; F:single-stranded telomeric DNA binding; ISS:HGNC. | | | | | | | | | | GO:0006397; P:mRNA processing; ISS:HGNC.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0050658; P:RNA transport; ISS:HGNC. | 161 | P22626 | 353 | ROA2_HUMAN Heterogeneous nuclear ribonucleopr... | 74 | 0.095 | 37.7 | 31 | 50 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; IDA:HGNC.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IDA:HGNC.::GO:0043047; F:single-stranded telomeric DNA binding; IDA:HGNC. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0050658; P:RNA transport; IDA:HGNC. | 162 | O43347 | 362 | MSI1H_HUMAN RNA-binding protein Musashi homol... | 156 | 0.00000006 | 57 | 25 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0007399; P:nervous system development; TAS:ProtInc. | 163 | Q2HJ60 | 341 | ROA2_BOVIN Heterogeneous nuclear ribonucleopr... | 66 | 0.15 | 37 | 30 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 164 | A7VJC2 | 353 | ROA2_RAT Heterogeneous nuclear ribonucleoprot... | 74 | 0.093 | 37.7 | 31 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 165 | P21522 | 342 | ROA1_SCHAM Heterogeneous nuclear ribonucleopr... | 51 | 0.72 | 35 | 31 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 166 | Q96DH6 | 328 | MSI2H_HUMAN RNA-binding protein Musashi homol... | 179 | 0.00000007 | 56.6 | 27 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 167 | Q5M9F1 | 428 | RBM34_RAT RNA-binding protein 34 OS=Rattus no... | 191 | 0.00000007 | 57 | 25 | 43 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 168 | P09651 | 372 | ROA1_HUMAN Heterogeneous nuclear ribonucleopr... | 58 | 0.063 | 38.1 | 34 | 48 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:HGNC.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; TAS:ProtInc.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; IDA:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003697; F:single-stranded DNA binding; IDA:HGNC.::GO:0003727; F:single-stranded RNA binding; IC:HGNC. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0051170; P:nuclear import; IDA:HGNC.::GO:0006405; P:RNA export from nucleus; IC:HGNC. | 169 | Q920Q6 | 346 | MSI2H_MOUSE RNA-binding protein Musashi homol... | 178 | 0.00000008 | 56.6 | 28 | 43 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005844; C:polysome; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:MGI. | | | | | | | | | | GO:0048864; P:stem cell development; IMP:UniProtKB. | 170 | P38922 | 454 | HRB1_YEAST Protein HRB1 OS=Saccharomyces cere... | 191 | 0.000001 | 52.8 | 25 | 41 | GO:0005737; C:cytoplasm; IDA:SGD.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; NAS:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:SGD. | | | | | | | | | | GO:0016973; P:poly(A)+ mRNA export from nucleus; IPI:SGD. | 171 | P0DJD4 | 496 | RBY1C_HUMAN RNA-binding motif protein, Y chro... | 76 | 1.1 | 34.7 | 28 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 172 | P04256 | 320 | ROA1_RAT Heterogeneous nuclear ribonucleoprot... | 58 | 0.058 | 38.1 | 34 | 48 | GO:0005737; C:cytoplasm; ISS:HGNC.::GO:0005654; C:nucleoplasm; ISS:HGNC.::GO:0005681; C:spliceosomal complex; ISS:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:RGD.::GO:0003697; F:single-stranded DNA binding; ISS:HGNC. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0051168; P:nuclear export; ISS:HGNC.::GO:0051170; P:nuclear import; ISS:HGNC.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 173 | A5A6H4 | 320 | ROA1_PANTR Heterogeneous nuclear ribonucleopr... | 58 | 0.06 | 38.1 | 34 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 174 | P49312 | 320 | ROA1_MOUSE Heterogeneous nuclear ribonucleopr... | 58 | 0.06 | 38.1 | 34 | 48 | GO:0005737; C:cytoplasm; ISS:HGNC.::GO:0005654; C:nucleoplasm; ISS:HGNC.::GO:0005681; C:spliceosomal complex; ISS:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; ISS:HGNC. | | | | | | | | | | GO:0000380; P:alternative nuclear mRNA splicing, via spliceosome; IDA:MGI.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0051168; P:nuclear export; ISS:HGNC.::GO:0051170; P:nuclear import; ISS:HGNC. | 175 | P09867 | 320 | ROA1_BOVIN Heterogeneous nuclear ribonucleopr... | 58 | 0.06 | 38.1 | 34 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 176 | Q22037 | 346 | ROA1_CAEEL Heterogeneous nuclear ribonucleopr... | 58 | 7.9 | 31.6 | 24 | 48 | GO:0000781; C:chromosome, telomeric region; IDA:WormBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0031581; P:hemidesmosome assembly; IGI:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040015; P:negative regulation of multicellular organism growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase. | 177 | Q4WJT7 | 825 | MRD1_ASPFU Multiple RNA-binding domain-contai... | 72 | 0.0005 | 45.1 | 25 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 178 | Q8CH84 | 359 | ELAV2_RAT ELAV-like protein 2 OS=Rattus norve... | 230 | 0.006 | 41.6 | 22 | 37 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 179 | O01671 | 321 | SXL_MEGSC Sex-lethal homolog OS=Megaselia sca... | 77 | 0.00002 | 48.9 | 29 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 180 | Q15717 | 326 | ELAV1_HUMAN ELAV-like protein 1 OS=Homo sapie... | 216 | 0.019 | 39.7 | 22 | 38 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0003729; F:mRNA binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0019901; F:protein kinase binding; IPI:UniProtKB. | | | | | | | | | | GO:0070935; P:3'-UTR-mediated mRNA stabilization; IDA:UniProtKB.::GO:0010467; P:gene expression; TAS:Reactome.::GO:0016071; P:mRNA metabolic process; TAS:Reactome.::GO:0007275; P:multicellular organismal development; TAS:ProtInc.::GO:0045727; P:positive regulation of translation; IDA:MGI. | 181 | Q8K3P4 | 362 | MSI1H_RAT RNA-binding protein Musashi homolog... | 156 | 0.0000001 | 56.2 | 25 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030855; P:epithelial cell differentiation; IEP:RGD.::GO:0009725; P:response to hormone stimulus; IMP:RGD. |