rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
241 | P48510 | 373 | DSK2_YEAST Ubiquitin domain-containing protei... | 56 | 0.00008 | 44.3 | 39 | 57 | GO:0005635; C:nuclear envelope; IGI:GOC. | | | | | | | | | | GO:0030674; F:protein binding, bridging; IMP:SGD. | | | | | | | | | | GO:0030433; P:ER-associated protein catabolic process; IMP:SGD.::GO:0007103; P:spindle pole body duplication in nuclear envelope; IGI:SGD. | 242 | Q29RK4 | 408 | RD23B_BOVIN UV excision repair protein RAD23 ... | 84 | 0.0004 | 42.4 | 27 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.::GO:0071942; C:XPC complex; ISS:UniProtKB. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 243 | Q6PUA2 | 1786 | TAF1B_ARATH Transcription initiation factor T... | 71 | 0.0004 | 42.4 | 32 | 59 | GO:0016020; C:membrane; IDA:TAIR.::GO:0005669; C:transcription factor TFIID complex; TAS:TAIR. | | | | | | | | | | GO:0003712; F:transcription cofactor activity; TAS:TAIR. | | | | | | | | | | GO:0016573; P:histone acetylation; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0009416; P:response to light stimulus; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 244 | Q84L33 | 371 | RD23A_ARATH Putative DNA repair protein RAD23... | 74 | 0.0007 | 41.2 | 39 | 55 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 245 | Q18KJ5 | 49 | RL40_HALWD 50S ribosomal protein L40e OS=Halo... | 35 | 0.001 | 38.1 | 60 | 71 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 246 | Q84L32 | 368 | RD23B_ARATH Putative DNA repair protein RAD23... | 74 | 0.002 | 40 | 39 | 55 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0070628; F:proteasome binding; IDA:TAIR.::GO:0043130; F:ubiquitin binding; IDA:TAIR. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 247 | Q10169 | 354 | DSK2_SCHPO Deubiquitination-protection protei... | 55 | 0.002 | 40 | 40 | 60 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0031593; F:polyubiquitin binding; IDA:PomBase. | | | | | | | | | | GO:0033554; P:cellular response to stress; NAS:PomBase.::GO:0030433; P:ER-associated protein catabolic process; ISS:PomBase.::GO:0042177; P:negative regulation of protein catabolic process; IMP:PomBase.::GO:0030474; P:spindle pole body duplication; ISS:PomBase. | 248 | Q8LRK9 | 1919 | TAF1A_ARATH Transcription initiation factor T... | 71 | 0.003 | 39.7 | 30 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 249 | P54725 | 363 | RD23A_HUMAN UV excision repair protein RAD23 ... | 78 | 0.003 | 39.3 | 33 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0031593; F:polyubiquitin binding; IDA:UniProtKB.::GO:0003697; F:single-stranded DNA binding; TAS:ProtInc. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006289; P:nucleotide-excision repair; IDA:UniProtKB.::GO:0045070; P:positive regulation of viral genome replication; IMP:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro.::GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB. | 250 | Q92353 | 468 | UBP6_SCHPO Ubiquitin carboxyl-terminal hydrol... | 58 | 0.003 | 39.3 | 33 | 57 | GO:0005654; C:nucleoplasm; IDA:PomBase.::GO:0000502; C:proteasome complex; IDA:PomBase. | | | | | | | | | | GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro.::GO:0004843; F:ubiquitin-specific protease activity; IDA:PomBase. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IC:PomBase.::GO:0071947; P:protein deubiquitination involved in ubiquitin-dependent protein catabolic process; IC:PomBase. | 251 | Q9H347 | 655 | UBQL3_HUMAN Ubiquilin-3 OS=Homo sapiens (Huma... | 72 | 0.004 | 39.3 | 35 | 56 | | | | | | | | | | | | | | | | | | | | | | 252 | Q99NB8 | 596 | UBQL4_MOUSE Ubiquilin-4 OS=Mus musculus (Mous... | 51 | 0.004 | 39.3 | 41 | 61 | GO:0005829; C:cytosol; IDA:MGI.::GO:0005789; C:endoplasmic reticulum membrane; IDA:MGI.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0031593; F:polyubiquitin binding; ISS:UniProtKB. | | | | | | | | | | GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB. | 253 | Q9UMX0 | 589 | UBQL1_HUMAN Ubiquilin-1 OS=Homo sapiens (Huma... | 72 | 0.005 | 38.9 | 36 | 53 | GO:0005783; C:endoplasmic reticulum; IDA:HGNC.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; NAS:UniProtKB.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0019900; F:kinase binding; IPI:UniProtKB. | | | | | | | | | | GO:0006915; P:apoptotic process; IMP:HGNC.::GO:0031396; P:regulation of protein ubiquitination; IDA:HGNC.::GO:0001666; P:response to hypoxia; IMP:HGNC. | 254 | Q5R684 | 589 | UBQL1_PONAB Ubiquilin-1 OS=Pongo abelii (Suma... | 72 | 0.005 | 38.9 | 36 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | | 255 | P54726 | 363 | RD23A_MOUSE UV excision repair protein RAD23 ... | 78 | 0.005 | 38.9 | 32 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 256 | Q67W65 | 1810 | TAF1_ORYSJ Transcription initiation factor TF... | 71 | 0.005 | 39.3 | 37 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 257 | A6NDN8 | 102 | UBIML_HUMAN Putative ubiquitin-like protein F... | 62 | 0.006 | 37 | 31 | 55 | | | | | | | | | | | | | | | | | | | | | | 258 | Q8C5U9 | 658 | UBQL3_MOUSE Ubiquilin-3 OS=Mus musculus (Mous... | 74 | 0.006 | 38.5 | 34 | 57 | | | | | | | | | | | | | | | | | | | | | | 259 | O74803 | 368 | RHP23_SCHPO UV excision repair protein rhp23 ... | 65 | 0.006 | 38.5 | 32 | 62 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005635; C:nuclear envelope; IDA:PomBase. | | | | | | | | | | GO:0003684; F:damaged DNA binding; ISS:PomBase.::GO:0031593; F:polyubiquitin binding; TAS:PomBase. | | | | | | | | | | GO:0030433; P:ER-associated protein catabolic process; ISS:PomBase.::GO:0042177; P:negative regulation of protein catabolic process; IMP:PomBase.::GO:0006289; P:nucleotide-excision repair; IMP:PomBase.::GO:0016567; P:protein ubiquitination; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; TAS:PomBase. | 260 | Q9JJP9 | 582 | UBQL1_RAT Ubiquilin-1 OS=Rattus norvegicus (R... | 72 | 0.009 | 38.1 | 36 | 53 | GO:0005783; C:endoplasmic reticulum; ISS:HGNC.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; ISS:HGNC.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0019904; F:protein domain specific binding; IPI:RGD. | | | | | | | | | | GO:0006915; P:apoptotic process; ISS:HGNC.::GO:0031396; P:regulation of protein ubiquitination; ISS:HGNC.::GO:0001666; P:response to hypoxia; ISS:HGNC. | 261 | Q8R317 | 582 | UBQL1_MOUSE Ubiquilin-1 OS=Mus musculus (Mous... | 72 | 0.01 | 38.1 | 36 | 53 | GO:0005783; C:endoplasmic reticulum; ISS:HGNC.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; ISS:HGNC.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0019215; F:intermediate filament binding; NAS:UniProtKB.::GO:0019900; F:kinase binding; ISS:UniProtKB.::GO:0005102; F:receptor binding; NAS:UniProtKB. | | | | | | | | | | GO:0006915; P:apoptotic process; ISS:HGNC.::GO:0031396; P:regulation of protein ubiquitination; ISS:HGNC.::GO:0001666; P:response to hypoxia; ISS:HGNC. | 262 | Q5AY89 | 418 | DDI1_EMENI DNA damage-inducible protein 1 OS=... | 66 | 0.01 | 38.1 | 35 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004190; F:aspartic-type endopeptidase activity; IEA:InterPro. | | | | | | | | | | GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:InterPro. | 263 | Q9NRR5 | 601 | UBQL4_HUMAN Ubiquilin-4 OS=Homo sapiens (Huma... | 66 | 0.01 | 38.1 | 33 | 55 | GO:0005829; C:cytosol; ISS:UniProtKB.::GO:0005789; C:endoplasmic reticulum membrane; ISS:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0031593; F:polyubiquitin binding; IDA:UniProtKB. | | | | | | | | | | GO:0032434; P:regulation of proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB. | 264 | A3KMV2 | 362 | RD23A_BOVIN UV excision repair protein RAD23 ... | 62 | 0.011 | 37.7 | 37 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003684; F:damaged DNA binding; IEA:InterPro. | | | | | | | | | | GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IEA:InterPro. | 265 | Q3IUP2 | 49 | RL40_NATPD 50S ribosomal protein L40e OS=Natr... | 35 | 0.011 | 35.4 | 57 | 71 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 266 | A4WL72 | 53 | RL40_PYRAR 50S ribosomal protein L40e OS=Pyro... | 48 | 0.014 | 35 | 42 | 56 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 267 | Q8TXM1 | 49 | RL40_METKA 50S ribosomal protein L40e OS=1009... | 44 | 0.016 | 35 | 55 | 64 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 268 | B9LSD1 | 49 | RL40_HALLT 50S ribosomal protein L40e OS=ACAM... | 41 | 0.018 | 35 | 51 | 63 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 269 | Q8RXF1 | 785 | SF3A1_ARATH Probable splicing factor 3A subun... | 68 | 0.025 | 37 | 34 | 57 | GO:0005684; C:U2-type spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB. | 270 | Q5UYU5 | 49 | RL40_HALMA 50S ribosomal protein L40e OS=B-18... | 34 | 0.029 | 34.3 | 59 | 65 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 271 | A8AAR8 | 55 | RL40_IGNH4 50S ribosomal protein L40e OS=Igni... | 48 | 0.04 | 33.9 | 46 | 58 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. |