rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q9US06 | 456 | PAF1_SCHPO RNA polymerase II-associated prote... | 76 | 0.0000000000004 | 68.2 | 55 | 67 | GO:0016593; C:Cdc73/Paf1 complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase. | | | | | | | | | | | | | | | | | | | | GO:0016571; P:histone methylation; ISS:PomBase.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase. | 2 | P38351 | 445 | PAF1_YEAST RNA polymerase II-associated prote... | 80 | 0.0000003 | 50.8 | 40 | 56 | GO:0016593; C:Cdc73/Paf1 complex; IPI:SGD.::GO:0035327; C:transcriptionally active chromatin; IDA:SGD. | | | | | | | | | | GO:0003682; F:chromatin binding; IDA:SGD.::GO:0000993; F:RNA polymerase II core binding; IPI:SGD.::GO:0000983; F:RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity; IDA:SGD.::GO:0001089; F:TFIIF-class binding transcription factor activity; IMP:SGD. | | | | | | | | | | GO:0000183; P:chromatin silencing at rDNA; IMP:SGD.::GO:0070911; P:global genome nucleotide-excision repair; IMP:SGD.::GO:0031124; P:mRNA 3'-end processing; IMP:SGD.::GO:0045910; P:negative regulation of DNA recombination; IMP:SGD.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:2001255; P:positive regulation of histone H3-K36 trimethylation; IMP:SGD.::GO:2001165; P:positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues; IMP:SGD.::GO:2001209; P:positive regulation of transcription elongation from RNA polymerase I promoter; IDA:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IMP:SGD.::GO:0031938; P:regulation of chromatin silencing at telomere; IMP:SGD.::GO:2001173; P:regulation of histone H2B conserved C-terminal lysine ubiquitination; IDA:SGD.::GO:0051569; P:regulation of histone H3-K4 methylation; IMP:SGD.::GO:0034401; P:regulation of transcription by chromatin organization; IMP:SGD.::GO:0000114; P:regulation of transcription involved in G1 phase of mitotic cell cycle; IMP:SGD.::GO:0090262; P:regulation of transcription-coupled nucleotide-excision repair; IGI:SGD.::GO:0006364; P:rRNA processing; IMP:SGD.::GO:0031126; P:snoRNA 3'-end processing; IMP:SGD.::GO:0001015; P:snoRNA transcription from an RNA polymerase II promoter; IMP:SGD.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; IMP:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IMP:SGD. | 3 | P32888 | 465 | VP19_HHV11 Triplex capsid protein VP19C OS=1)... | 84 | 0.11 | 34.3 | 35 | 43 | GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0019069; P:viral capsid assembly; IEA:InterPro. | 4 | P17586 | 465 | VP19_HHV14 Triplex capsid protein VP19C OS=1)... | 84 | 0.11 | 34.3 | 35 | 43 | GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0019069; P:viral capsid assembly; IEA:InterPro. | 5 | Q2KJ14 | 532 | PAF1_BOVIN RNA polymerase II-associated facto... | 63 | 0.32 | 33.1 | 25 | 51 | GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000993; F:RNA polymerase II core binding; ISS:UniProtKB. | | | | | | | | | | GO:0001711; P:endodermal cell fate commitment; ISS:UniProtKB.::GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0045749; P:negative regulation of S phase of mitotic cell cycle; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0031442; P:positive regulation of mRNA 3'-end processing; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 6 | Q8N7H5 | 531 | PAF1_HUMAN RNA polymerase II-associated facto... | 62 | 0.35 | 32.7 | 26 | 52 | GO:0016593; C:Cdc73/Paf1 complex; IDA:UniProtKB. | | | | | | | | | | GO:0000993; F:RNA polymerase II core binding; IDA:UniProtKB. | | | | | | | | | | GO:0001711; P:endodermal cell fate commitment; ISS:UniProtKB.::GO:0033523; P:histone H2B ubiquitination; IDA:UniProtKB.::GO:0010390; P:histone monoubiquitination; IDA:UniProtKB.::GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; IDA:UniProtKB.::GO:0045749; P:negative regulation of S phase of mitotic cell cycle; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0031442; P:positive regulation of mRNA 3'-end processing; IMP:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 7 | Q5RAX0 | 533 | PAF1_PONAB RNA polymerase II-associated facto... | 62 | 0.39 | 32.7 | 26 | 52 | GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000993; F:RNA polymerase II core binding; ISS:UniProtKB. | | | | | | | | | | GO:0001711; P:endodermal cell fate commitment; ISS:UniProtKB.::GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0045749; P:negative regulation of S phase of mitotic cell cycle; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0031442; P:positive regulation of mRNA 3'-end processing; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 8 | Q75AL4 | 287 | NCB5R_ASHGO NADH-cytochrome b5 reductase 1 OS... | 29 | 1.2 | 31.2 | 52 | 66 | GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004128; F:cytochrome-b5 reductase activity; IEA:EC. | | | | | | | | | | | 9 | A2BD83 | 524 | PAF1_XENLA RNA polymerase II-associated facto... | 78 | 1.4 | 31.2 | 28 | 49 | GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000993; F:RNA polymerase II core binding; ISS:UniProtKB. | | | | | | | | | | GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 10 | Q6P2Y1 | 520 | PAF1_XENTR RNA polymerase II-associated facto... | 78 | 1.6 | 30.8 | 28 | 49 | GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000993; F:RNA polymerase II core binding; ISS:UniProtKB. | | | | | | | | | | GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 11 | Q4U0S5 | 503 | PAF1_DANRE RNA polymerase II-associated facto... | 78 | 2 | 30.8 | 28 | 47 | GO:0016593; C:Cdc73/Paf1 complex; IDA:ZFIN. | | | | | | | | | | GO:0000993; F:RNA polymerase II core binding; ISS:UniProtKB. | | | | | | | | | | GO:0007507; P:heart development; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 12 | Q869V1 | 533 | NRAM1_DICDI Metal transporter nramp1 homolog ... | 51 | 5.3 | 29.6 | 29 | 47 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0032010; C:phagolysosome; IDA:dictyBase.::GO:0005802; C:trans-Golgi network; IDA:dictyBase.::GO:0012506; C:vesicle membrane; IDA:dictyBase. | | | | | | | | | | GO:0005381; F:iron ion transmembrane transporter activity; IDA:dictyBase. | | | | | | | | | | GO:0006879; P:cellular iron ion homeostasis; IDA:dictyBase.::GO:0006909; P:phagocytosis; IEP:dictyBase.::GO:0009617; P:response to bacterium; IMP:dictyBase. | 13 | P90783 | 425 | PAF1_CAEEL RNA polymerase II-associated facto... | 81 | 6 | 29.3 | 27 | 47 | GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB. | | | | | | | | | | | | | | | | | | | | GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 14 | Q8K2T8 | 535 | PAF1_MOUSE RNA polymerase II-associated facto... | 62 | 6.4 | 29.3 | 26 | 52 | GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000993; F:RNA polymerase II core binding; ISS:UniProtKB. | | | | | | | | | | GO:0001711; P:endodermal cell fate commitment; IMP:UniProtKB.::GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0045749; P:negative regulation of S phase of mitotic cell cycle; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0031442; P:positive regulation of mRNA 3'-end processing; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0019827; P:stem cell maintenance; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 15 | Q4V886 | 535 | PAF1_RAT RNA polymerase II-associated factor ... | 62 | 6.8 | 29.3 | 26 | 52 | GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000993; F:RNA polymerase II core binding; ISS:UniProtKB. | | | | | | | | | | GO:0001711; P:endodermal cell fate commitment; ISS:UniProtKB.::GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0045749; P:negative regulation of S phase of mitotic cell cycle; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0031442; P:positive regulation of mRNA 3'-end processing; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 16 | Q8LAY8 | 354 | P2C69_ARATH Probable protein phosphatase 2C 6... | 71 | 9.4 | 28.9 | 28 | 51 | GO:0008287; C:protein serine/threonine phosphatase complex; IEA:InterPro. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004722; F:protein serine/threonine phosphatase activity; IEA:InterPro. | | | | | | | | | | GO:0006470; P:protein dephosphorylation; IEA:InterPro. | 17 | Q9RYX8 | 607 | THIC_DEIRA Phosphomethylpyrimidine synthase O... | 41 | 9.7 | 28.9 | 44 | 54 | | | | | | | | | | | GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0016829; F:lyase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009228; P:thiamine biosynthetic process; IEA:UniProtKB-KW. |