| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | Q6YGZ5 | 633 | BMAL1_TYTAL Aryl hydrocarbon receptor nuclear... | 69 | 0.1 | 37.4 | 23 | 48 | GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 32 | Q9WTL8 | 632 | BMAL1_MOUSE Aryl hydrocarbon receptor nuclear... | 69 | 0.11 | 37.4 | 23 | 48 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005667; C:transcription factor complex; IDA:MGI. | | | | | | | | | | GO:0043425; F:bHLH transcription factor binding; IPI:BHF-UCL.::GO:0003677; F:DNA binding; IPI:MGI.::GO:0046982; F:protein heterodimerization activity; IPI:BHF-UCL.::GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IC:BHF-UCL.::GO:0001190; F:RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription; IDA:BHF-UCL.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0007623; P:circadian rhythm; IDA:MGI.::GO:0000060; P:protein import into nucleus, translocation; IDA:MGI.::GO:0042176; P:regulation of protein catabolic process; IDA:MGI. | 33 | Q9I8T7 | 633 | BMAL1_CHICK Aryl hydrocarbon receptor nuclear... | 69 | 0.11 | 37.4 | 23 | 48 | GO:0005737; C:cytoplasm; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | | 34 | A2T6X9 | 766 | SIM1_PANTR Single-minded homolog 1 OS=Pan tro... | 80 | 0.009 | 40.8 | 26 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 35 | P81133 | 766 | SIM1_HUMAN Single-minded homolog 1 OS=Homo sa... | 80 | 0.009 | 40.8 | 26 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 36 | A1YFY6 | 766 | SIM1_PANPA Single-minded homolog 1 OS=Pan pan... | 80 | 0.009 | 40.8 | 26 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 37 | Q61079 | 657 | SIM2_MOUSE Single-minded homolog 2 OS=Mus mus... | 80 | 0.018 | 39.7 | 25 | 50 | GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IDA:MGI.::GO:0046982; F:protein heterodimerization activity; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009880; P:embryonic pattern specification; IMP:MGI.::GO:0030324; P:lung development; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 38 | Q5R4T2 | 625 | BMAL1_PONAB Aryl hydrocarbon receptor nuclear... | 69 | 0.099 | 37.4 | 23 | 48 | GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 39 | Q9I8A9 | 805 | HIF1A_XENLA Hypoxia-inducible factor 1-alpha ... | 90 | 0.028 | 39.3 | 20 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0035035; F:histone acetyltransferase binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0001666; P:response to hypoxia; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 40 | Q8QGQ7 | 622 | BMAL2_CHICK Aryl hydrocarbon receptor nuclear... | 70 | 0.09 | 37.7 | 29 | 50 | GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 41 | Q99743 | 824 | NPAS2_HUMAN Neuronal PAS domain-containing pr... | 38 | 8.6 | 31.6 | 34 | 61 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005667; C:transcription factor complex; IPI:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IPI:MGI.::GO:0051879; F:Hsp90 protein binding; IDA:BHF-UCL.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0007417; P:central nervous system development; TAS:ProtInc.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 42 | Q25637 | 893 | PER_PERAM Period circadian protein OS=Peripla... | 45 | 0.75 | 34.7 | 36 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW. | 43 | Q1CRH7 | 461 | MNME_HELPH tRNA modification GTPase MnmE OS=H... | 88 | 0.039 | 38.5 | 27 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006400; P:tRNA modification; IEA:InterPro. | 44 | Q8WYA1 | 636 | BMAL2_HUMAN Aryl hydrocarbon receptor nuclear... | 35 | 0.3 | 35.8 | 43 | 57 | GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000982; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0007623; P:circadian rhythm; IDA:MGI.::GO:0009649; P:entrainment of circadian clock; NAS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL. | 45 | P41739 | 800 | ARNT_RAT Aryl hydrocarbon receptor nuclear tr... | 73 | 4.9 | 32.3 | 26 | 45 | | | | | | | | | | | GO:0046982; F:protein heterodimerization activity; IDA:RGD. | | | | | | | | | | GO:0001666; P:response to hypoxia; IEP:RGD.::GO:0009636; P:response to toxin; NAS:RGD. | 46 | P56645 | 1201 | PER3_HUMAN Period circadian protein homolog 3... | 57 | 0.052 | 38.5 | 32 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 47 | P27540 | 789 | ARNT_HUMAN Aryl hydrocarbon receptor nuclear ... | 73 | 5.5 | 32 | 26 | 45 | | | | | | | | | | | GO:0017162; F:aryl hydrocarbon receptor binding; IPI:BHF-UCL.::GO:0046982; F:protein heterodimerization activity; IPI:BHF-UCL.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003713; F:transcription coactivator activity; TAS:ProtInc. | | | | | | | | | | GO:0042789; P:mRNA transcription from RNA polymerase II promoter; IC:BHF-UCL.::GO:0001938; P:positive regulation of endothelial cell proliferation; IC:BHF-UCL.::GO:0045648; P:positive regulation of erythrocyte differentiation; IC:BHF-UCL.::GO:0045821; P:positive regulation of glycolysis; IC:BHF-UCL.::GO:0046886; P:positive regulation of hormone biosynthetic process; IDA:BHF-UCL.::GO:0030949; P:positive regulation of vascular endothelial growth factor receptor signaling pathway; IC:BHF-UCL.::GO:0010575; P:positive regulation vascular endothelial growth factor production; IDA:BHF-UCL.::GO:0043619; P:regulation of transcription from RNA polymerase II promoter in response to oxidative stress; IDA:BHF-UCL.::GO:0001666; P:response to hypoxia; IDA:BHF-UCL. | 48 | O02748 | 790 | ARNT_RABIT Aryl hydrocarbon receptor nuclear ... | 73 | 4.6 | 32.3 | 26 | 45 | | | | | | | | | | | | | | | | | | | | | | 49 | Q25020 | 358 | PER_HYACE Period circadian protein OS=Hyaloph... | 69 | 4.8 | 32 | 26 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0048511; P:rhythmic process; IEA:UniProtKB-KW. | 50 | Q9BE97 | 790 | ARNT_BOVIN Aryl hydrocarbon receptor nuclear ... | 73 | 5.6 | 32 | 26 | 45 | GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 51 | Q8IXF0 | 933 | NPAS3_HUMAN Neuronal PAS domain-containing pr... | 87 | 0.073 | 38.1 | 30 | 49 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 52 | Q9QZQ0 | 925 | NPAS3_MOUSE Neuronal PAS domain-containing pr... | 87 | 0.077 | 37.7 | 30 | 49 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 53 | Q9WVS9 | 862 | CLOCK_RAT Circadian locomoter output cycles p... | 89 | 0.089 | 37.7 | 27 | 45 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0009649; P:entrainment of circadian clock; IEP:RGD. | 54 | Q6YGZ4 | 851 | CLOCK_TYTAL Circadian locomoter output cycles... | 89 | 0.092 | 37.7 | 27 | 45 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 55 | Q8QGQ6 | 875 | CLOCK_CHICK Circadian locomoter output cycles... | 89 | 0.098 | 37.7 | 27 | 45 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | | 56 | O15516 | 846 | CLOCK_HUMAN Circadian locomoter output cycles... | 89 | 0.1 | 37.4 | 27 | 45 | GO:0005694; C:chromosome; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005667; C:transcription factor complex; IPI:MGI. | | | | | | | | | | GO:0070888; F:E-box binding; IDA:BHF-UCL.::GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0000978; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding; IDA:BHF-UCL.::GO:0000982; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity; ISS:BHF-UCL.::GO:0001190; F:RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription; ISS:BHF-UCL.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0071479; P:cellular response to ionizing radiation; IDA:UniProtKB.::GO:0032922; P:circadian regulation of gene expression; ISS:BHF-UCL.::GO:0000077; P:DNA damage checkpoint; IMP:UniProtKB.::GO:0009648; P:photoperiodism; TAS:ProtInc. | 57 | Q91YA8 | 865 | CLOCK_SPAJD Circadian locomoter output cycles... | 89 | 0.1 | 37.4 | 27 | 45 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 58 | Q91YB2 | 865 | CLOCK_SPACA Circadian locomoter output cycles... | 89 | 0.11 | 37.4 | 27 | 45 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 59 | Q91YB0 | 865 | CLOCK_NANGA Circadian locomoter output cycles... | 89 | 0.11 | 37.4 | 27 | 45 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 60 | O08785 | 855 | CLOCK_MOUSE Circadian locomoter output cycles... | 89 | 0.11 | 37.4 | 27 | 45 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005667; C:transcription factor complex; IDA:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IC:BHF-UCL.::GO:0001190; F:RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription; IDA:BHF-UCL.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0032922; P:circadian regulation of gene expression; IMP:BHF-UCL.::GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW. | 61 | Q5RAK8 | 846 | CLOCK_PONAB Circadian locomoter output cycles... | 89 | 0.11 | 37.4 | 27 | 45 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro. | | | | | | | | | | GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.::GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. |
