Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Coccidiodis posadasii silveria
Locus:
CPSG_00065
Length:
465
Number of sequences:
10228
Description:
Coccidioides posadasii Silveira conserved hypothetical protein
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q0CPF9    286   EIF3G_ASPTN Eukaryotic translation initiation...410.63     35.8     46     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
32Q6Z1C0    572   NUCL1_ORYSJ Nucleolin 1 OS=Oryza sativa subsp...1210.69     36.2     28     43
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
33Q5RC80    524   RBM39_PONAB RNA-binding protein 39 OS=Pongo a...412.1     34.7     34     59GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
34Q14498    530   RBM39_HUMAN RNA-binding protein 39 OS=Homo sa...412.2     34.3     34     59GO:0005813; C:centrosome; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:HPA.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
35Q8VH51    530   RBM39_MOUSE RNA-binding protein 39 OS=Mus mus...412.3     34.3     34     59GO:0005634; C:nucleus; TAS:MGI.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003713; F:transcription coactivator activity; TAS:MGI.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; TAS:MGI.
36A7Y3K2    2057   YCF1_IPOPU Putative membrane protein ycf1 OS=...922.3     34.7     27     47GO:0031969; C:chloroplast membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
37Q4G0P3    5121   HYDIN_HUMAN Hydrocephalus-inducing protein ho...841.6     35     23     52
38Q7XTT4    707   NUCL2_ORYSJ Nucleolin 2 OS=Oryza sativa subsp...1282.4     34.3     24     40
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
39Q85WU2    2046   YCF1_PINKO Putative protein ycf1 OS=Pinus kor...1452.9     34.3     23     44GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
40Q28521    320   ROA1_MACMU Heterogeneous nuclear ribonucleopr...553.4     33.5     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
41Q8CGC6    750   RBM28_MOUSE RNA-binding protein 28 OS=Mus mus...884.6     33.5     34     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
42P53883    403   NOP13_YEAST Nucleolar protein 13 OS=Saccharom...775.2     33.1     26     40GO:0005730; C:nucleolus; IDA:SGD.::GO:0030684; C:preribosome; IDA:SGD.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
43P51989    346   RO21_XENLA Heterogeneous nuclear ribonucleopr...556.1     32.7     29     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
44Q9NW13    759   RBM28_HUMAN RNA-binding protein 28 OS=Homo sa...796.5     33.1     33     44GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
45O94432    474   YHKF_SCHPO Uncharacterized RNA-binding protei...1066.5     32.7     24     41GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0005849; C:mRNA cleavage factor complex; ISS:PomBase.
GO:0003730; F:mRNA 3'-UTR binding; NAS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.
46Q08473    344   SQD_DROME RNA-binding protein squid OS=Drosop...637.1     32.7     27     48GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0000785; C:chromatin; IDA:FlyBase.::GO:0005737; C:cytoplasm; TAS:FlyBase.::GO:0035062; C:omega speckle; IDA:FlyBase.::GO:0005703; C:polytene chromosome puff; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
GO:0003730; F:mRNA 3'-UTR binding; TAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0008069; P:dorsal/ventral axis specification, ovarian follicular epithelium; IMP:FlyBase.::GO:0006406; P:mRNA export from nucleus; NAS:FlyBase.::GO:0033119; P:negative regulation of RNA splicing; IMP:FlyBase.::GO:0017148; P:negative regulation of translation; TAS:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:FlyBase.::GO:0030720; P:oocyte localization involved in germarium-derived egg chamber formation; IMP:FlyBase.::GO:0016325; P:oocyte microtubule cytoskeleton organization; IMP:FlyBase.::GO:0007297; P:ovarian follicle cell migration; IMP:FlyBase.::GO:0045451; P:pole plasm oskar mRNA localization; IEP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.
47Q8C7E9    632   CSTFT_MOUSE Cleavage stimulation factor subun...1187.2     32.7     29     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI.
GO:0006378; P:mRNA polyadenylation; TAS:MGI.
48Q92JF7    1795   SCA2_RICCN Putative surface cell antigen sca2...1138.8     32.7     29     42GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
records
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