| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
61 | Q05856 | 199 | RSMB_DROME Small nuclear ribonucleoprotein-as... | 69 | 1.1 | 32.3 | 35 | 54 | GO:0015030; C:Cajal body; IDA:FlyBase.::GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0045495; C:pole plasm; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0030532; C:small nuclear ribonucleoprotein complex; ISS:FlyBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007281; P:germ cell development; IMP:FlyBase.::GO:0008406; P:gonad development; IMP:FlyBase.::GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase. | 62 | Q10163 | 147 | RSMB_SCHPO Small nuclear ribonucleoprotein-as... | 75 | 1.4 | 32 | 37 | 52 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005681; C:spliceosomal complex; IC:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; IC:PomBase. | 63 | Q89AW5 | 241 | RNFE_BUCBP Electron transport complex protein... | 42 | 2.1 | 31.6 | 36 | 57 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW. | 64 | Q5JIE0 | 76 | RUXX_PYRKO Putative snRNP Sm-like protein OS=... | 88 | 3 | 29.6 | 27 | 47 | GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | | | | | | | | | | | | 65 | O42978 | 80 | LSM5_SCHPO U6 snRNA-associated Sm-like protei... | 36 | 3.5 | 29.6 | 31 | 58 | GO:0005730; C:nucleolus; ISS:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0005681; C:spliceosomal complex; NAS:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.::GO:0005688; C:U6 snRNP; ISS:PomBase. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:PomBase. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; ISS:PomBase.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:PomBase.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW. | 66 | Q55EX5 | 97 | LSM5_DICDI Probable U6 snRNA-associated Sm-li... | 42 | 4 | 29.6 | 26 | 55 | GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:dictyBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:dictyBase.::GO:0005688; C:U6 snRNP; ISS:dictyBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; ISS:dictyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase. | 67 | Q0W8R9 | 72 | RUXX_UNCMA Putative snRNP Sm-like protein OS=... | 67 | 4.9 | 28.9 | 31 | 48 | GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | | | | | | | | | | | | 68 | B2FL26 | 91 | HFQ_STRMK Protein hfq OS=Stenotrophomonas mal... | 61 | 5.1 | 29.3 | 28 | 48 | | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0006950; P:response to stress; IEA:UniProtKB-KW. | 69 | B4SRA5 | 91 | HFQ_STRM5 Protein hfq OS=Stenotrophomonas mal... | 61 | 5.1 | 29.3 | 28 | 48 | | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0006950; P:response to stress; IEA:UniProtKB-KW. | 70 | Q55A45 | 274 | RSMB_DICDI Small nuclear ribonucleoprotein-as... | 89 | 5.4 | 30.4 | 27 | 47 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 71 | C0Q9X9 | 1401 | RPOB_DESAH DNA-directed RNA polymerase subuni... | 50 | 8.4 | 30 | 32 | 50 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro. | | | | | | | | | | |
