| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P07273 | 309 | TFS2_YEAST Transcription elongation factor S-... | 316 | 2e-88 | 273 | 47 | 62 | GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0001139; F:core RNA polymerase II recruiting transcription factor activity; IMP:SGD.::GO:0000993; F:RNA polymerase II core binding; IPI:SGD.::GO:0001012; F:RNA polymerase II regulatory region DNA binding; IDA:SGD.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0001193; P:maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase II promoter; IMP:SGD.::GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0045899; P:positive regulation of RNA polymerase II transcriptional preinitiation complex assembly; IMP:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0031440; P:regulation of mRNA 3'-end processing; IMP:SGD.::GO:0031564; P:transcription antitermination; IDA:SGD.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; IDA:SGD.::GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IMP:SGD. | 2 | P49373 | 293 | TFS2_SCHPO Transcription elongation factor S-... | 296 | 3e-75 | 239 | 44 | 60 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000991; F:core RNA polymerase II binding transcription factor activity; IC:PomBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0002182; P:cytoplasmic translational elongation; NAS:PomBase.::GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase. | 3 | Q15560 | 299 | TCEA2_HUMAN Transcription elongation factor A... | 258 | 7e-44 | 157 | 37 | 55 | GO:0008023; C:transcription elongation factor complex; NAS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; NAS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; NAS:UniProtKB. | 4 | Q148K0 | 300 | TCEA2_BOVIN Transcription elongation factor A... | 260 | 1e-40 | 149 | 36 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 5 | P23193 | 301 | TCEA1_HUMAN Transcription elongation factor A... | 273 | 2e-40 | 148 | 36 | 54 | GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 6 | Q29RL9 | 301 | TCEA1_BOVIN Transcription elongation factor A... | 268 | 7e-40 | 147 | 34 | 55 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 7 | Q9QVN7 | 299 | TCEA2_MOUSE Transcription elongation factor A... | 258 | 1e-39 | 146 | 35 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 8 | Q63799 | 299 | TCEA2_RAT Transcription elongation factor A p... | 258 | 5e-39 | 144 | 34 | 53 | GO:0005634; C:nucleus; TAS:RGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:RGD.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 9 | Q4KLL0 | 301 | TCEA1_RAT Transcription elongation factor A p... | 268 | 5e-39 | 144 | 34 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 10 | P10711 | 301 | TCEA1_MOUSE Transcription elongation factor A... | 268 | 7e-39 | 144 | 34 | 55 | GO:0005654; C:nucleoplasm; IDA:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030218; P:erythrocyte differentiation; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 11 | Q54YG9 | 319 | TCEA1_DICDI Transcription elongation factor A... | 326 | 7e-36 | 136 | 32 | 47 | GO:0005654; C:nucleoplasm; ISS:dictyBase. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:dictyBase. | 12 | P20232 | 313 | TFS2_DROME Transcription elongation factor S-... | 134 | 2e-35 | 135 | 47 | 64 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 13 | P23881 | 347 | TCEA3_MOUSE Transcription elongation factor A... | 322 | 4e-34 | 132 | 30 | 45 | GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 14 | Q2KI09 | 349 | TCEA3_BOVIN Transcription elongation factor A... | 39 | 0.12 | 37.4 | 44 | 69 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 15 | O75764 | 348 | TCEA3_HUMAN Transcription elongation factor A... | 51 | 0.54 | 35.4 | 41 | 63 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 16 | P52652 | 308 | TFS2_CAEEL Putative transcription elongation ... | 301 | 2e-29 | 118 | 28 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003746; F:translation elongation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006354; P:transcription elongation, DNA-dependent; IEA:InterPro. | 17 | P0C8F6 | 243 | TFS2_ASFM2 Transcription factor S-II-related ... | 90 | 0.0000000002 | 63.5 | 36 | 56 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 18 | Q8N8B7 | 351 | TEANC_HUMAN Transcription elongation factor A... | 205 | 0.0000000003 | 64.3 | 28 | 45 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. | 19 | Q9GMV6 | 350 | TEANC_MACFA Transcription elongation factor A... | 207 | 0.0000000003 | 63.9 | 29 | 44 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. | 20 | P0C8F8 | 243 | TFS2_ASFWA Transcription factor S-II-related ... | 90 | 0.000000001 | 60.8 | 36 | 56 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 21 | P0C8F7 | 243 | TFS2_ASFP4 Transcription factor S-II-related ... | 90 | 0.000000001 | 60.8 | 36 | 56 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 22 | P27948 | 243 | TFS2_ASFB7 Transcription factor S-II-related ... | 90 | 0.000000001 | 60.8 | 36 | 56 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 23 | P0C8F5 | 243 | TFS2_ASFK5 Transcription factor S-II-related ... | 90 | 0.000000004 | 59.7 | 34 | 56 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 24 | Q6C0K9 | 822 | BYE1_YARLI Transcription factor BYE1 OS=lipol... | 85 | 0.000000009 | 60.1 | 35 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 25 | Q3US16 | 359 | TEANC_MOUSE Transcription elongation factor A... | 249 | 0.00000008 | 56.6 | 27 | 45 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. | 26 | Q92576 | 2039 | PHF3_HUMAN PHD finger protein 3 OS=Homo sapie... | 96 | 0.0000003 | 55.5 | 32 | 58 | GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007275; P:multicellular organismal development; NAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. | 27 | Q6GZP4 | 92 | 081R_FRG3G Putative transcription elongation ... | 60 | 0.0000003 | 51.6 | 40 | 53 | | | | | | | | | | | GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. | 28 | Q9Y2Y1 | 108 | RPC10_HUMAN DNA-directed RNA polymerase III s... | 40 | 0.0000004 | 52 | 55 | 75 | GO:0005666; C:DNA-directed RNA polymerase III complex; TAS:ProtInc. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome. | 29 | Q9CQZ7 | 108 | RPC10_MOUSE DNA-directed RNA polymerase III s... | 39 | 0.0000005 | 51.6 | 56 | 74 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW. | 30 | Q04307 | 110 | RPC10_YEAST DNA-directed RNA polymerase III s... | 34 | 0.000002 | 49.7 | 56 | 74 | GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006386; P:termination of RNA polymerase III transcription; IMP:SGD.::GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IMP:SGD. | 31 | Q2M2S7 | 108 | RPC10_BOVIN DNA-directed RNA polymerase III s... | 39 | 0.000002 | 49.7 | 54 | 72 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW. |
