Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Candida (Clavispora) lusitaniae
Locus:
CLUG_00058
Length:
309
Number of sequences:
5941
Description:
hypothetical protein
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P36954    125   RPB9_HUMAN DNA-directed RNA polymerase II sub...430.4     34.3     33     58GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; TAS:ProtInc.
GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
62Q2ULC6    1802   UTP10_ASPOR U3 small nucleolar RNA-associated...690.58     35.8     30     57GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
63Q91FH5    140   VF349_IIV6 Putative transcription elongation ...340.93     33.5     38     59
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
64O27369    104   RPOM_METTH DNA-directed RNA polymerase subuni...420.93     32.7     38     52
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
65O94703    119   RPA12_SCHPO DNA-directed RNA polymerase I sub...721.1     33.1     32     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; IGI:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006360; P:transcription from RNA polymerase I promoter; IGI:PomBase.::GO:0006353; P:transcription termination, DNA-dependent; IGI:PomBase.
66A5PK23    599   MED26_BOVIN Mediator of RNA polymerase II tra...701.9     33.9     31     53GO:0016592; C:mediator complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0001104; F:RNA polymerase II transcription cofactor activity; ISS:UniProtKB.
67Q57362    1111   Y195A_HAEIN Uncharacterized MscS family prote...1082.3     33.9     23     52GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0055085; P:transmembrane transport; IEA:InterPro.
68O95402    600   MED26_HUMAN Mediator of RNA polymerase II tra...922.6     33.5     27     49GO:0016592; C:mediator complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IDA:UniProtKB.::GO:0003713; F:transcription coactivator activity; TAS:ProtInc.
GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.
69Q90YY5    597   MED26_XENLA Mediator of RNA polymerase II tra...712.9     33.1     28     55GO:0016592; C:mediator complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0001104; F:RNA polymerase II transcription cofactor activity; ISS:UniProtKB.
70Q9V4F9    1483   MED26_DROME Mediator of RNA polymerase II tra...703.9     33.1     30     56GO:0016592; C:mediator complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0001104; F:RNA polymerase II transcription cofactor activity; ISS:UniProtKB.
GO:0006911; P:phagocytosis, engulfment; IMP:FlyBase.
71O57187    259   RPO5_VACCA DNA-directed RNA polymerase 30 kDa...375.2     32     35     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
72P21082    259   RP30_VACCC DNA-directed RNA polymerase 30 kDa...375.2     32     35     51GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
73P21603    259   RP30_VACCW DNA-directed RNA polymerase 30 kDa...375.2     32     35     51GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
74P33796    259   RP30_VAR67 DNA-directed RNA polymerase 30 kDa...375.3     32     35     51GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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