| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
61 | Q9SQU4 | 462 | C3H34_ARATH Zinc finger CCCH domain-containin... | 83 | 0.69 | 35.4 | 36 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 62 | Q12X08 | 567 | DNLI_METBU DNA ligase OS=Methanococcoides bur... | 52 | 0.75 | 35.4 | 37 | 54 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003910; F:DNA ligase (ATP) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW. | 63 | P47973 | 320 | TTP_RAT Tristetraprolin OS=Rattus norvegicus ... | 75 | 0.95 | 35 | 31 | 45 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0071889; F:14-3-3 protein binding; ISS:UniProtKB.::GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:UniProtKB.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; TAS:RGD.::GO:0032680; P:regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006950; P:response to stress; ISS:UniProtKB. | 64 | Q8GVZ8 | 496 | C3H48_ORYSJ Putative zinc finger CCCH domain-... | 58 | 0.95 | 35 | 31 | 43 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 65 | P22893 | 319 | TTP_MOUSE Tristetraprolin OS=Mus musculus (Mo... | 75 | 1 | 34.7 | 31 | 45 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005829; C:cytosol; IDA:MGI.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0071889; F:14-3-3 protein binding; ISS:UniProtKB.::GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:UniProtKB.::GO:0007243; P:intracellular protein kinase cascade; IDA:MGI.::GO:0050728; P:negative regulation of inflammatory response; IMP:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IDA:MGI.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006950; P:response to stress; ISS:UniProtKB.::GO:0050779; P:RNA destabilization; IMP:MGI. | 66 | Q6FXX1 | 226 | CWC24_CANGA Pre-mRNA-splicing factor CWC24 OS... | 49 | 1 | 34.3 | 35 | 49 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 67 | P47976 | 325 | CTH1_YEAST mRNA decay factor CTH1 OS=Saccharo... | 65 | 1.2 | 34.7 | 29 | 38 | GO:0005634; C:nucleus; IC:SGD. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006879; P:cellular iron ion homeostasis; IGI:SGD.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; IGI:SGD. | 68 | P56388 | 129 | CART_MOUSE Cocaine- and amphetamine-regulated... | 52 | 1.3 | 33.1 | 25 | 52 | GO:0005615; C:extracellular space; IDA:HGNC. | | | | | | | | | | GO:0005184; F:neuropeptide hormone activity; TAS:MGI. | | | | | | | | | | GO:0000186; P:activation of MAPKK activity; IDA:HGNC.::GO:0008343; P:adult feeding behavior; IDA:HGNC.::GO:0001678; P:cellular glucose homeostasis; ISS:HGNC.::GO:0009267; P:cellular response to starvation; IDA:HGNC.::GO:0032922; P:circadian regulation of gene expression; ISS:HGNC.::GO:0032099; P:negative regulation of appetite; IMP:HGNC.::GO:0045779; P:negative regulation of bone resorption; IGI:HGNC.::GO:0045671; P:negative regulation of osteoclast differentiation; TAS:HGNC.::GO:0007218; P:neuropeptide signaling pathway; TAS:MGI.::GO:0045777; P:positive regulation of blood pressure; ISS:HGNC.::GO:0032812; P:positive regulation of epinephrine secretion; ISS:HGNC.::GO:0051971; P:positive regulation of transmission of nerve impulse; ISS:HGNC.::GO:0007268; P:synaptic transmission; IEA:UniProtKB-KW. | 69 | Q5NAV3 | 466 | C3H5_ORYSJ Zinc finger CCCH domain-containing... | 76 | 1.5 | 34.3 | 34 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 70 | Q96K80 | 434 | ZC3HA_HUMAN Zinc finger CCCH domain-containin... | 136 | 1.6 | 34.3 | 29 | 39 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 71 | Q8R205 | 435 | ZC3HA_MOUSE Zinc finger CCCH domain-containin... | 136 | 1.7 | 34.3 | 29 | 39 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 72 | Q9FNG6 | 378 | C3H51_ARATH Zinc finger CCCH domain-containin... | 51 | 1.8 | 34.3 | 33 | 49 | GO:0016020; C:membrane; IDA:TAIR. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 73 | Q8GX84 | 343 | C3H1_ARATH Zinc finger CCCH domain-containing... | 51 | 1.8 | 33.9 | 33 | 49 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 74 | Q7Z3Z2 | 195 | RD3_HUMAN Protein RD3 OS=Homo sapiens (Human)... | 128 | 1.9 | 33.5 | 26 | 44 | | | | | | | | | | | | | | | | | | | | | GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0007601; P:visual perception; IEA:UniProtKB-KW. | 75 | Q5ZDJ6 | 462 | C3H8_ORYSJ Zinc finger CCCH domain-containing... | 161 | 2 | 34.3 | 27 | 37 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 76 | P49192 | 129 | CART_RAT Cocaine- and amphetamine-regulated t... | 52 | 2 | 32.7 | 25 | 52 | GO:0005615; C:extracellular space; IDA:HGNC. | | | | | | | | | | GO:0005515; F:protein binding; IPI:RGD. | | | | | | | | | | GO:0000186; P:activation of MAPKK activity; IDA:HGNC.::GO:0008343; P:adult feeding behavior; IDA:HGNC.::GO:0001678; P:cellular glucose homeostasis; ISS:HGNC.::GO:0009267; P:cellular response to starvation; IDA:HGNC.::GO:0032922; P:circadian regulation of gene expression; IDA:HGNC.::GO:0001696; P:gastric acid secretion; TAS:RGD.::GO:0032099; P:negative regulation of appetite; IDA:HGNC.::GO:0070093; P:negative regulation of glucagon secretion; IDA:RGD.::GO:0007218; P:neuropeptide signaling pathway; IEA:UniProtKB-KW.::GO:0045777; P:positive regulation of blood pressure; ISS:HGNC.::GO:0032812; P:positive regulation of epinephrine secretion; ISS:HGNC.::GO:0051971; P:positive regulation of transmission of nerve impulse; ISS:HGNC.::GO:0050796; P:regulation of insulin secretion; IDA:RGD.::GO:0070253; P:somatostatin secretion; IDA:RGD.::GO:0007268; P:synaptic transmission; IEA:UniProtKB-KW. | 77 | Q84W91 | 468 | C3H32_ARATH Zinc finger CCCH domain-containin... | 143 | 2.1 | 33.9 | 24 | 37 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 78 | Q6P5D3 | 1388 | DHX57_MOUSE Putative ATP-dependent RNA helica... | 26 | 2.2 | 34.3 | 50 | 58 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 79 | Q6BYU0 | 232 | CWC24_DEBHA Pre-mRNA-splicing factor CWC24 OS... | 70 | 2.3 | 33.5 | 37 | 49 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 80 | Q69NK8 | 613 | C3H59_ORYSJ Zinc finger CCCH domain-containin... | 127 | 2.3 | 33.9 | 25 | 39 | | | | | | | | | | | GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 81 | Q67ER4 | 343 | R113A_BOVIN RING finger protein 113A OS=Bos t... | 77 | 2.4 | 33.5 | 25 | 39 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 82 | Q55G16 | 355 | RN113_DICDI RING finger protein 113 homolog O... | 32 | 2.5 | 33.5 | 38 | 59 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 83 | Q9BDP9 | 66 | CART_PIG Cocaine- and amphetamine-regulated t... | 46 | 2.8 | 31.2 | 26 | 54 | GO:0005615; C:extracellular space; ISS:HGNC. | | | | | | | | | | | | | | | | | | | | GO:0000186; P:activation of MAPKK activity; ISS:HGNC.::GO:0008343; P:adult feeding behavior; ISS:HGNC.::GO:0001678; P:cellular glucose homeostasis; ISS:HGNC.::GO:0009267; P:cellular response to starvation; ISS:HGNC.::GO:0032922; P:circadian regulation of gene expression; ISS:HGNC.::GO:0032099; P:negative regulation of appetite; ISS:HGNC.::GO:0007218; P:neuropeptide signaling pathway; IEA:UniProtKB-KW.::GO:0045777; P:positive regulation of blood pressure; ISS:HGNC.::GO:0032812; P:positive regulation of epinephrine secretion; ISS:HGNC.::GO:0051971; P:positive regulation of transmission of nerve impulse; ISS:HGNC.::GO:0007268; P:synaptic transmission; IEA:UniProtKB-KW. | 84 | P0CQ64 | 329 | CWC24_CRYNJ Pre-mRNA-splicing factor CWC24 OS... | 31 | 2.8 | 33.5 | 45 | 58 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 85 | P0CQ65 | 329 | CWC24_CRYNB Pre-mRNA-splicing factor CWC24 OS... | 31 | 2.8 | 33.5 | 45 | 58 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 86 | Q8L7N8 | 375 | C3H57_ARATH Zinc finger CCCH domain-containin... | 143 | 2.9 | 33.5 | 23 | 38 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; TAS:TAIR.::GO:0004518; F:nuclease activity; TAS:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 87 | Q4VGL6 | 1130 | RC3H1_MOUSE Roquin OS=Mus musculus (Mouse). G... | 36 | 3.1 | 33.5 | 42 | 50 | GO:0000932; C:cytoplasmic mRNA processing body; IDA:BHF-UCL.::GO:0010494; C:cytoplasmic stress granule; IDA:BHF-UCL. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:BHF-UCL.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0033962; P:cytoplasmic mRNA processing body assembly; IMP:BHF-UCL.::GO:0046007; P:negative regulation of activated T cell proliferation; IMP:BHF-UCL.::GO:0030889; P:negative regulation of B cell proliferation; IMP:BHF-UCL.::GO:0002635; P:negative regulation of germinal center formation; IMP:BHF-UCL.::GO:0045623; P:negative regulation of T-helper cell differentiation; IMP:MGI.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; IMP:BHF-UCL.::GO:0043488; P:regulation of mRNA stability; IMP:BHF-UCL.::GO:0050856; P:regulation of T cell receptor signaling pathway; IMP:BHF-UCL. | 88 | Q16568 | 116 | CART_HUMAN Cocaine- and amphetamine-regulated... | 46 | 3.2 | 32 | 28 | 54 | GO:0005615; C:extracellular space; IDA:HGNC.::GO:0030141; C:secretory granule; IDA:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0000186; P:activation of MAPKK activity; ISS:HGNC.::GO:0008343; P:adult feeding behavior; ISS:HGNC.::GO:0001678; P:cellular glucose homeostasis; IDA:HGNC.::GO:0009267; P:cellular response to starvation; ISS:HGNC.::GO:0032922; P:circadian regulation of gene expression; ISS:HGNC.::GO:0032099; P:negative regulation of appetite; ISS:HGNC.::GO:0045779; P:negative regulation of bone resorption; IMP:HGNC.::GO:0045671; P:negative regulation of osteoclast differentiation; TAS:HGNC.::GO:0007218; P:neuropeptide signaling pathway; IEA:UniProtKB-KW.::GO:0045777; P:positive regulation of blood pressure; IDA:HGNC.::GO:0032812; P:positive regulation of epinephrine secretion; IDA:HGNC.::GO:0051971; P:positive regulation of transmission of nerve impulse; IDA:HGNC.::GO:0007268; P:synaptic transmission; IEA:UniProtKB-KW. | 89 | Q6NUC6 | 1114 | RC3H1_XENLA Roquin OS=Xenopus laevis (African... | 36 | 3.3 | 33.5 | 42 | 50 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 90 | Q5TC82 | 1133 | RC3H1_HUMAN Roquin OS=Homo sapiens (Human). G... | 36 | 3.3 | 33.5 | 42 | 50 | GO:0000932; C:cytoplasmic mRNA processing body; ISS:BHF-UCL.::GO:0010494; C:cytoplasmic stress granule; ISS:BHF-UCL. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:BHF-UCL.::GO:0004842; F:ubiquitin-protein ligase activity; TAS:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0033962; P:cytoplasmic mRNA processing body assembly; ISS:BHF-UCL.::GO:0046007; P:negative regulation of activated T cell proliferation; ISS:BHF-UCL.::GO:0030889; P:negative regulation of B cell proliferation; ISS:BHF-UCL.::GO:0002635; P:negative regulation of germinal center formation; ISS:BHF-UCL.::GO:0045623; P:negative regulation of T-helper cell differentiation; ISS:BHF-UCL.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; ISS:BHF-UCL.::GO:0043488; P:regulation of mRNA stability; ISS:BHF-UCL.::GO:0050856; P:regulation of T cell receptor signaling pathway; ISS:BHF-UCL. | 91 | Q6CSS6 | 229 | CWC24_KLULA Pre-mRNA-splicing factor CWC24 OS... | 43 | 3.4 | 32.7 | 37 | 53 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |
