Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Candida (Clavispora) lusitaniae
Locus:
CLUG_00014
Length:
361
Number of sequences:
5941
Description:
hypothetical protein
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q5RJC5    435   C3H67_ARATH Zinc finger CCCH domain-containin...1340.06     38.9     29     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
32P23949    367   TISD_MOUSE Zinc finger protein 36, C3H1 type-...680.061     38.9     31     40GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IDA:MGI.::GO:0043488; P:regulation of mRNA stability; IDA:MGI.::GO:0033077; P:T cell differentiation in thymus; IGI:BHF-UCL.
33Q2R4J4    444   C3H63_ORYSJ Zinc finger CCCH domain-containin...1370.07     38.5     28     39
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
34Q5JLB5    439   C3H12_ORYSJ Zinc finger CCCH domain-containin...1390.071     38.5     27     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
35Q6BTT1    223   YTH1_DEBHA mRNA 3'-end-processing protein YTH...1141.4     33.9     25     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
36Q6AT25    493   C3H34_ORYSJ Zinc finger CCCH domain-containin...820.094     38.1     30     45
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
37P53781    324   TTP_BOVIN Tristetraprolin OS=Bos taurus (Bovi...730.094     38.1     34     45GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0071889; F:14-3-3 protein binding; ISS:UniProtKB.::GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:UniProtKB.::GO:0006402; P:mRNA catabolic process; ISS:UniProtKB.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006950; P:response to stress; ISS:UniProtKB.
38Q0JD07    346   C3H28_ORYSJ Zinc finger CCCH domain-containin...534.3     32.7     36     53
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
39Q6DJP7    269   CPSF4_XENLA Cleavage and polyadenylation spec...890.31     36.2     31     45GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
40Q6C922    193   YTH1_YARLI mRNA 3'-end-processing protein YTH...1152.8     33.1     29     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
41Q6S9E0    325   TTP_SHEEP Tristetraprolin OS=Ovis aries (Shee...730.14     37.4     34     45GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0071889; F:14-3-3 protein binding; ISS:UniProtKB.::GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0070935; P:3'-UTR-mediated mRNA stabilization; ISS:UniProtKB.::GO:0006402; P:mRNA catabolic process; ISS:UniProtKB.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; ISS:UniProtKB.::GO:0006950; P:response to stress; ISS:UniProtKB.
42Q66KE3    269   CPSF4_XENTR Cleavage and polyadenylation spec...890.25     36.6     31     45GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
43P17431    338   TISB_RAT Zinc finger protein 36, C3H1 type-li...640.17     37.4     34     42GO:0005829; C:cytosol; IDA:MGI.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0017091; F:AU-rich element binding; IMP:RGD.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
44P23950    338   TISB_MOUSE Zinc finger protein 36, C3H1 type-...640.18     37.4     34     42GO:0005634; C:nucleus; IDA:MGI.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IDA:MGI.::GO:0006417; P:regulation of translation; IMP:MGI.::GO:0033077; P:T cell differentiation in thymus; IGI:BHF-UCL.::GO:0001570; P:vasculogenesis; IMP:MGI.
45Q07352    338   TISB_HUMAN Zinc finger protein 36, C3H1 type-...640.18     37     34     42GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0010467; P:gene expression; TAS:Reactome.::GO:0043488; P:regulation of mRNA stability; IDA:MGI.
46O19137    243   CPSF4_BOVIN Cleavage and polyadenylation spec...1131.2     34.3     24     45GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
47Q6NPN3    465   C3H58_ARATH Zinc finger CCCH domain-containin...1080.2     37.4     34     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
48O95639    269   CPSF4_HUMAN Cleavage and polyadenylation spec...1130.77     35     24     45GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046778; P:modification by virus of host mRNA processing; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0019058; P:viral infectious cycle; TAS:Reactome.
49Q5FVR7    243   CPSF4_RAT Cleavage and polyadenylation specif...1131.2     34.3     24     45GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
50P26651    326   TTP_HUMAN Tristetraprolin OS=Homo sapiens (Hu...730.22     37     34     45GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0005829; C:cytosol; IDA:MGI.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0071889; F:14-3-3 protein binding; IDA:UniProtKB.::GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0019957; F:C-C chemokine binding; IPI:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003729; F:mRNA binding; IDA:MGI.::GO:0019901; F:protein kinase binding; IPI:UniProtKB.::GO:0003727; F:single-stranded RNA binding; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0070935; P:3'-UTR-mediated mRNA stabilization; IDA:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; IDA:UniProtKB.::GO:0032680; P:regulation of tumor necrosis factor production; IDA:UniProtKB.::GO:0006950; P:response to stress; IDA:UniProtKB.
51Q5ACW2    216   CWC24_CANAL Pre-mRNA-splicing factor CWC24 OS...700.36     35.8     31     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
52Q752S4    250   CWC24_ASHGO Pre-mRNA-splicing factor CWC24 OS...1080.38     35.8     25     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
53Q0J952    711   C3H32_ORYSJ Zinc finger CCCH domain-containin...1110.42     36.2     30     39
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
54Q6FTL0    209   YTH1_CANGA mRNA 3'-end-processing protein YTH...850.46     35.4     31     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
55Q9STM4    448   C3H43_ARATH Zinc finger CCCH domain-containin...1350.49     35.8     26     36GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
56Q8IZP6    322   R113B_HUMAN RING finger protein 113B OS=Homo ...340.55     35.4     41     59
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
57P47977    285   CTH2_YEAST mRNA decay factor CTH2 OS=Saccharo...650.63     35.4     31     38GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006879; P:cellular iron ion homeostasis; IMP:SGD.::GO:0000956; P:nuclear-transcribed mRNA catabolic process; IMP:SGD.
58Q94AD9    404   C3H3_ARATH Zinc finger CCCH domain-containing...1310.64     35.4     25     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
59O17917    384   RN113_CAEEL RING finger protein 113 homolog O...350.64     35.4     37     54
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase.
60Q59T36    215   YTH1_CANAL mRNA 3'-end-processing protein YTH...991.9     33.5     31     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042493; P:response to drug; IMP:CGD.
61Q9SQU4    462   C3H34_ARATH Zinc finger CCCH domain-containin...830.69     35.4     36     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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