| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
61 | Q10D80 | 330 | CCH11_ORYSJ Cyclin-H1-1 OS=Oryza sativa subsp... | 225 | 0.000001 | 53.1 | 24 | 44 | GO:0005675; C:holo TFIIH complex; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. | 62 | P0C654 | 298 | CCNC_CAEBR Cyclin-C OS=Caenorhabditis briggsa... | 269 | 0.000002 | 52.4 | 25 | 43 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 63 | Q9TYP2 | 302 | CCNC_CAEEL Cyclin-C OS=Caenorhabditis elegans... | 105 | 0.00001 | 49.7 | 33 | 50 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 64 | A4RD79 | 363 | SSN8_MAGO7 RNA polymerase II holoenzyme cycli... | 216 | 0.00005 | 48.5 | 26 | 44 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 65 | Q3ZBL9 | 320 | CCNH_BOVIN Cyclin-H OS=Bos taurus (Bovine). G... | 253 | 0.00006 | 48.1 | 22 | 41 | GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 66 | Q1EAW8 | 318 | SSN8_COCIM RNA polymerase II holoenzyme cycli... | 180 | 0.0001 | 47 | 27 | 41 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 67 | Q9HE63 | 345 | SSN8_NEUCR RNA polymerase II holoenzyme cycli... | 224 | 0.0001 | 47 | 27 | 42 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 68 | Q4R7U4 | 323 | CCNH_MACFA Cyclin-H OS=Macaca fascicularis (C... | 175 | 0.0002 | 46.6 | 26 | 43 | GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 69 | Q6CP20 | 304 | SSN8_KLULA RNA polymerase II holoenzyme cycli... | 175 | 0.0002 | 46.2 | 29 | 45 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 70 | P51946 | 323 | CCNH_HUMAN Cyclin-H OS=Homo sapiens (Human). ... | 175 | 0.0002 | 46.2 | 26 | 43 | GO:0019907; C:cyclin-dependent protein kinase activating kinase holoenzyme complex; IDA:UniProtKB.::GO:0005675; C:holo TFIIH complex; IDA:UniProtKB. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000080; P:G1 phase of mitotic cell cycle; TAS:Reactome.::GO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome.::GO:0000086; P:G2/M transition of mitotic cell cycle; TAS:Reactome.::GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 71 | Q61458 | 323 | CCNH_MOUSE Cyclin-H OS=Mus musculus (Mouse). ... | 175 | 0.0003 | 45.8 | 26 | 43 | GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 72 | P47821 | 323 | SSN8_YEAST RNA polymerase II holoenzyme cycli... | 200 | 0.0004 | 45.1 | 26 | 42 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.::GO:0016592; C:mediator complex; IDA:SGD. | | | | | | | | | | GO:0016538; F:cyclin-dependent protein kinase regulator activity; IMP:SGD.::GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0000411; P:positive regulation of transcription by galactose; IMP:SGD.::GO:0010673; P:positive regulation of transcription from RNA polymerase II promoter during meiosis; IMP:SGD.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 73 | Q5BBA8 | 302 | SSN8_EMENI RNA polymerase II holoenzyme cycli... | 170 | 0.0005 | 45.1 | 26 | 44 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 74 | Q9R1A0 | 323 | CCNH_RAT Cyclin-H OS=Rattus norvegicus (Rat).... | 175 | 0.0008 | 44.7 | 25 | 43 | GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 75 | Q75AX7 | 332 | SSN8_ASHGO RNA polymerase II holoenzyme cycli... | 173 | 0.001 | 43.9 | 28 | 45 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 76 | Q2UDB2 | 301 | SSN8_ASPOR RNA polymerase II holoenzyme cycli... | 212 | 0.001 | 43.9 | 25 | 39 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 77 | Q6FJE8 | 339 | SSN8_CANGA RNA polymerase II holoenzyme cycli... | 175 | 0.002 | 43.5 | 25 | 43 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 78 | Q0CV29 | 301 | SSN8_ASPTN RNA polymerase II holoenzyme cycli... | 170 | 0.002 | 42.7 | 27 | 42 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 79 | P37366 | 393 | CCL1_YEAST Cyclin CCL1 OS=Saccharomyces cerev... | 131 | 0.002 | 43.1 | 28 | 42 | GO:0005739; C:mitochondrion; IDA:SGD.::GO:0070985; C:TFIIK complex; IDA:SGD. | | | | | | | | | | GO:0016538; F:cyclin-dependent protein kinase regulator activity; IGI:SGD.::GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IDA:SGD.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006366; P:transcription from RNA polymerase II promoter; IDA:SGD. | 80 | Q9C1M4 | 319 | SSN8_GIBMO RNA polymerase II holoenzyme cycli... | 161 | 0.003 | 42.7 | 29 | 48 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 81 | Q8W5S1 | 336 | CCH11_ARATH Cyclin-H1-1 OS=Arabidopsis thalia... | 209 | 0.004 | 42.4 | 25 | 40 | GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005675; C:holo TFIIH complex; IEA:InterPro. | | | | | | | | | | GO:0004672; F:protein kinase activity; IDA:TAIR.::GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. | 82 | Q4WZT9 | 302 | SSN8_ASPFU RNA polymerase II holoenzyme cycli... | 170 | 0.004 | 42 | 26 | 42 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 83 | Q6CK68 | 394 | BUR2_KLULA Protein BUR2 OS=1267 / NRRL Y-1140... | 192 | 0.005 | 42.4 | 23 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 84 | Q0D9C7 | 419 | CCB22_ORYSJ Cyclin-B2-2 OS=Oryza sativa subsp... | 175 | 0.009 | 41.2 | 26 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro. | 85 | A2YH60 | 419 | CCB22_ORYSI Cyclin-B2-2 OS=Oryza sativa subsp... | 175 | 0.009 | 41.2 | 26 | 42 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro. | 86 | Q6CAC7 | 280 | SSN8_YARLI RNA polymerase II holoenzyme cycli... | 180 | 0.011 | 40.8 | 25 | 41 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 87 | Q55F19 | 286 | CCNH_DICDI Putative cyclin-H OS=Dictyostelium... | 179 | 0.022 | 39.7 | 22 | 42 | GO:0005675; C:holo TFIIH complex; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 88 | Q2GVK1 | 364 | SSN8_CHAGB RNA polymerase II holoenzyme cycli... | 210 | 0.024 | 40 | 25 | 38 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 89 | Q05949 | 395 | BUR2_YEAST Protein BUR2 OS=Saccharomyces cere... | 190 | 0.049 | 38.9 | 23 | 42 | GO:0000307; C:cyclin-dependent protein kinase holoenzyme complex; IPI:SGD.::GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0016538; F:cyclin-dependent protein kinase regulator activity; IPI:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0000070; P:mitotic sister chromatid segregation; IGI:SGD.::GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IMP:SGD.::GO:0051571; P:positive regulation of histone H3-K4 methylation; IMP:SGD.::GO:0033184; P:positive regulation of histone ubiquitination; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IMP:SGD. | 90 | A1C7R6 | 302 | SSN8_ASPCL RNA polymerase II holoenzyme cycli... | 157 | 0.093 | 37.7 | 26 | 42 | GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 91 | Q9GP34 | 335 | CCNH_ECHMU Probable cyclin-H OS=Echinococcus ... | 146 | 0.15 | 37.4 | 25 | 41 | GO:0005675; C:holo TFIIH complex; IEA:InterPro. | | | | | | | | | | GO:0019901; F:protein kinase binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro. |
