| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | O74835 | 1690 | RRP5_SCHPO rRNA biogenesis protein rrp5 OS=Sc... | 1785 | 0 | 1108 | 38 | 59 | GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase. | | | | | | | | | | GO:0042134; F:rRNA primary transcript binding; ISS:PomBase.::GO:0030515; F:snoRNA binding; ISS:PomBase. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; ISS:PomBase. | 2 | Q05022 | 1729 | RRP5_YEAST rRNA biogenesis protein RRP5 OS=Sa... | 1813 | 0 | 946 | 35 | 56 | GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD. | | | | | | | | | | GO:0008266; F:poly(U) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000464; P:endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD. | 3 | Q6NS46 | 1862 | RRP5_MOUSE Protein RRP5 homolog OS=Mus muscul... | 292 | 0.0003 | 50.1 | 23 | 43 | GO:0005829; C:cytosol; IDA:MGI.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; TAS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; TAS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; TAS:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 4 | Q14690 | 1871 | RRP5_HUMAN Protein RRP5 homolog OS=Homo sapie... | 216 | 8.5 | 35 | 25 | 42 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008134; F:transcription factor binding; IPI:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 5 | A7MB10 | 1874 | RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus... | 58 | 4 | 36.2 | 33 | 57 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 6 | Q9HZ71 | 559 | RS1_PSEAE 30S ribosomal protein S1 OS=12228).... | 167 | 0.055 | 42 | 23 | 46 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 7 | Q49XT0 | 393 | RS1_STAS1 30S ribosomal protein S1 OS=DSM 202... | 123 | 0.11 | 40.8 | 24 | 50 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 8 | Q92HM4 | 568 | RS1_RICCN 30S ribosomal protein S1 OS=Rickett... | 252 | 0.00001 | 54.3 | 21 | 46 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 9 | Q4ULF1 | 568 | RS1_RICFE 30S ribosomal protein S1 OS=Rickett... | 252 | 0.000002 | 56.2 | 21 | 47 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 10 | Q1RJH1 | 572 | RS1_RICBR 30S ribosomal protein S1 OS=Rickett... | 273 | 0.00000004 | 62 | 21 | 45 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 11 | O06000 | 382 | RS1H_BACC1 30S ribosomal protein S1 homolog O... | 370 | 0.0004 | 48.5 | 22 | 43 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 12 | P0AG70 | 557 | RS1_SHIFL 30S ribosomal protein S1 OS=Shigell... | 370 | 0.006 | 45.1 | 22 | 42 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 13 | P0AG67 | 557 | RS1_ECOLI 30S ribosomal protein S1 OS=Escheri... | 370 | 0.006 | 45.1 | 22 | 42 | GO:0022627; C:cytosolic small ribosomal subunit; IDA:EcoCyc.::GO:0016020; C:membrane; IDA:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:EcoCyc.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:2000766; P:negative regulation of cytoplasmic translation; IEP:EcoCyc.::GO:0006412; P:translation; IMP:EcoCyc. | 14 | P0AG68 | 557 | RS1_ECOL6 30S ribosomal protein S1 OS=Escheri... | 370 | 0.006 | 45.1 | 22 | 42 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 15 | P0AG69 | 557 | RS1_ECO57 30S ribosomal protein S1 OS=Escheri... | 370 | 0.006 | 45.1 | 22 | 42 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 16 | P38494 | 382 | RS1H_BACSU 30S ribosomal protein S1 homolog O... | 257 | 0.0008 | 47.8 | 21 | 47 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 17 | P37985 | 557 | RS1_DICD3 30S ribosomal protein S1 OS=Dickeya... | 389 | 0.004 | 45.4 | 22 | 41 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 18 | Q68WL4 | 568 | RS1_RICTY 30S ribosomal protein S1 OS=Rickett... | 252 | 0.000006 | 55.1 | 21 | 46 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 19 | Q7A5J0 | 391 | RS1_STAAN 30S ribosomal protein S1 OS=Staphyl... | 399 | 0.031 | 42.7 | 21 | 39 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 20 | Q99U14 | 391 | RS1_STAAM 30S ribosomal protein S1 OS=Staphyl... | 399 | 0.031 | 42.7 | 21 | 39 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 21 | Q9ZD28 | 568 | RS1_RICPR 30S ribosomal protein S1 OS=Rickett... | 252 | 0.000006 | 54.7 | 21 | 46 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 22 | Q8NWM8 | 391 | RS1_STAAW 30S ribosomal protein S1 OS=Staphyl... | 399 | 0.026 | 42.7 | 21 | 39 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 23 | Q6G987 | 391 | RS1_STAAS 30S ribosomal protein S1 OS=Staphyl... | 399 | 0.026 | 42.7 | 21 | 39 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 24 | Q5HFU7 | 391 | RS1_STAAC 30S ribosomal protein S1 OS=Staphyl... | 399 | 0.026 | 42.7 | 21 | 39 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 25 | Q4L6I1 | 392 | RS1_STAHJ 30S ribosomal protein S1 OS=Staphyl... | 267 | 0.033 | 42.4 | 24 | 44 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 26 | P50889 | 429 | RS1_LEULA 40S ribosomal protein S1 OS=Leucono... | 77 | 0.000003 | 55.5 | 39 | 62 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 27 | Q6GGT5 | 391 | RS1_STAAR 30S ribosomal protein S1 OS=Staphyl... | 314 | 0.4 | 38.9 | 22 | 39 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 28 | Q9ZKF6 | 552 | RS1_HELPJ 30S ribosomal protein S1 OS=Helicob... | 580 | 0.0008 | 47.8 | 19 | 38 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 29 | P56008 | 556 | RS1_HELPY 30S ribosomal protein S1 OS=pylori)... | 573 | 0.009 | 44.7 | 20 | 38 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 30 | O06147 | 481 | RS1_MYCTU 30S ribosomal protein S1 OS=Mycobac... | 284 | 0.00009 | 50.8 | 22 | 42 | GO:0005618; C:cell wall; IDA:MTBBASE.::GO:0005829; C:cytosol; IDA:MTBBASE.::GO:0005886; C:plasma membrane; IDA:MTBBASE.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0040007; P:growth; IMP:MTBBASE.::GO:0006412; P:translation; IEA:InterPro. | 31 | P46836 | 481 | RS1_MYCLE 30S ribosomal protein S1 OS=Mycobac... | 156 | 0.018 | 43.5 | 24 | 46 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. |
