Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Coccidiodis immitis RMSCC 2394
Locus:
CIRG_00314
Length:
1918
Number of sequences:
10408
Description:
rRNA biogenesis protein RRP5
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
691A5IMM8    708   PNP_THEP1 Polyribonucleotide nucleotidyltrans...692     37     29     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
692A8EU19    725   PNP_ARCB4 Polyribonucleotide nucleotidyltrans...682     37     32     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
693Q64112    472   IFIT2_MOUSE Interferon-induced protein with t...1592.1     36.6     26     43
GO:0005488; F:binding; IEA:InterPro.
GO:0035457; P:cellular response to interferon-alpha; IDA:MGI.
694A8F725    710   PNP_THELT Polyribonucleotide nucleotidyltrans...1162.1     37     25     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
695B4U6R7    703   PNP_HYDS0 Polyribonucleotide nucleotidyltrans...672.2     37     31     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
696Q96N46    770   TTC14_HUMAN Tetratricopeptide repeat protein ...932.2     37     26     48
GO:0003723; F:RNA binding; IEA:InterPro.
697P20459    304   IF2A_YEAST Eukaryotic translation initiation ...682.2     36.2     31     54GO:0005850; C:eukaryotic translation initiation factor 2 complex; IMP:SGD.::GO:0043614; C:multi-eIF complex; IDA:SGD.::GO:0005840; C:ribosome; TAS:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; TAS:SGD.
698A4G647    710   PNP_HERAR Polyribonucleotide nucleotidyltrans...832.2     37     28     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
699B7KIQ3    718   PNP_CYAP7 Polyribonucleotide nucleotidyltrans...682.3     37     32     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
700A1WLP8    757   PNP_VEREI Polyribonucleotide nucleotidyltrans...976.9     35.4     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
701A6QBH4    729   PNP_SULNB Polyribonucleotide nucleotidyltrans...792.5     36.6     29     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
702P68101    315   IF2A_RAT Eukaryotic translation initiation fa...682.5     36.2     29     51GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005850; C:eukaryotic translation initiation factor 2 complex; IEA:InterPro.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
703Q6ZWX6    315   IF2A_MOUSE Eukaryotic translation initiation ...682.5     36.2     29     51GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0005850; C:eukaryotic translation initiation factor 2 complex; IEA:InterPro.::GO:0005634; C:nucleus; IDA:MGI.
GO:0043022; F:ribosome binding; ISS:UniProtKB.::GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
GO:0046777; P:protein autophosphorylation; IDA:MGI.::GO:0043558; P:regulation of translational initiation in response to stress; IDA:MGI.
704P68102    315   IF2A_BOVIN Eukaryotic translation initiation ...682.5     36.2     29     51GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005850; C:eukaryotic translation initiation factor 2 complex; IEA:InterPro.::GO:0005634; C:nucleus; ISS:AgBase.
GO:0043022; F:ribosome binding; ISS:UniProtKB.::GO:0003743; F:translation initiation factor activity; ISS:AgBase.
GO:0043558; P:regulation of translational initiation in response to stress; ISS:AgBase.
705A8Z660    728   PNP_SULMW Polyribonucleotide nucleotidyltrans...872.5     36.6     32     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
706B9EBG0    703   PNP_MACCJ Polyribonucleotide nucleotidyltrans...672.5     36.6     30     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
707B1I393    741   PNP_DESAP Polyribonucleotide nucleotidyltrans...692.5     36.6     32     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
708Q1J1D0    721   PNP_DEIGD Polyribonucleotide nucleotidyltrans...662.5     36.6     33     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
709P05198    315   IF2A_HUMAN Eukaryotic translation initiation ...682.6     36.2     29     51GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005850; C:eukaryotic translation initiation factor 2 complex; IEA:InterPro.::GO:0005844; C:polysome; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0043022; F:ribosome binding; IDA:UniProtKB.::GO:0003743; F:translation initiation factor activity; IDA:UniProtKB.
GO:0006987; P:activation of signaling protein activity involved in unfolded protein response; TAS:Reactome.
710Q9W420    1831   SPT6H_DROME Transcription elongation factor S...772.6     37     21     56GO:0035363; C:histone locus body; IDA:FlyBase.::GO:0005705; C:polytene chromosome interband; IDA:UniProtKB.::GO:0005703; C:polytene chromosome puff; IDA:UniProtKB.::GO:0008023; C:transcription elongation factor complex; IPI:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; IDA:FlyBase.
GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IMP:FlyBase.::GO:0002805; P:regulation of antimicrobial peptide biosynthetic process; IMP:FlyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IEP:UniProtKB.
711P56286    306   IF2A_SCHPO Eukaryotic translation initiation ...692.6     36.2     28     54GO:0005829; C:cytosol; IDA:PomBase.::GO:0005850; C:eukaryotic translation initiation factor 2 complex; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0003743; F:translation initiation factor activity; ISS:PomBase.
GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase.::GO:0031575; P:mitotic cell cycle G1/S transition checkpoint; IMP:PomBase.::GO:0043561; P:regulation of translational initiation in response to osmotic stress; IMP:PomBase.
712Q5ZLX2    315   IF2A_CHICK Eukaryotic translation initiation ...682.8     36.2     29     51GO:0005850; C:eukaryotic translation initiation factor 2 complex; IEA:InterPro.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
713Q7V606    723   PNP_PROMM Polyribonucleotide nucleotidyltrans...843.1     36.6     27     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
714A1BDY1    732   PNP_CHLPD Polyribonucleotide nucleotidyltrans...663.2     36.2     38     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
715C1D8W8    701   PNP_LARHH Polyribonucleotide nucleotidyltrans...893.2     36.2     28     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
716B7K339    718   PNP_CYAP8 Polyribonucleotide nucleotidyltrans...683.2     36.2     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
717Q7VAZ5    722   PNP_PROMA Polyribonucleotide nucleotidyltrans...793.9     36.2     29     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
718O74970    612   PRP39_SCHPO Pre-mRNA-processing factor 39 OS=...2244     35.8     21     41GO:0000243; C:commitment complex; ISS:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase.
GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:PomBase.
719C5CPZ9    263   Y3119_VARPS UPF0176 protein Vapar_3119 OS=Var...844.1     35.4     31     46
720B1XJU0    714   PNP_SYNP2 Polyribonucleotide nucleotidyltrans...744.3     35.8     34     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
721Q7ZTK4    315   IF2A_XENLA Eukaryotic translation initiation ...684.3     35.4     29     50GO:0005850; C:eukaryotic translation initiation factor 2 complex; IEA:InterPro.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
records
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