Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Coccidiodis immitis RMSCC 2394
Locus:
CIRG_00251
Length:
1385
Number of sequences:
10408
Description:
DNA-directed RNA polymerase
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38671    1423   RPOM_NEUCR DNA-directed RNA polymerase, mitoc...13710     1008     40     58GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
2P13433    1351   RPOM_YEAST DNA-directed RNA polymerase, mitoc...10340     729     39     57GO:0034245; C:mitochondrial DNA-directed RNA polymerase complex; IDA:SGD.::GO:0042645; C:mitochondrial nucleoid; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IDA:SGD.
GO:0000002; P:mitochondrial genome maintenance; IMP:SGD.::GO:0006390; P:transcription from mitochondrial promoter; IDA:SGD.
3O13993    1154   RPOM_SCHPO DNA-directed RNA polymerase, mitoc...283     36.2     43     79GO:0005829; C:cytosol; IDA:PomBase.::GO:0005759; C:mitochondrial matrix; ISS:PomBase.
GO:0003899; F:DNA-directed RNA polymerase activity; ISS:PomBase.::GO:0001044; F:mitochondrial RNA polymerase regulatory region sequence-specific DNA binding; IDA:PomBase.
GO:0000002; P:mitochondrial genome maintenance; ISS:PomBase.::GO:0006390; P:transcription from mitochondrial promoter; ISS:PomBase.
4Q9LFV6    1011   RPOT2_ARATH DNA-directed RNA polymerase 2, ch...7981e-166     532     38     56GO:0009507; C:chloroplast; TAS:TAIR.::GO:0005739; C:mitochondrion; TAS:TAIR.::GO:0042651; C:thylakoid membrane; TAS:TAIR.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
5O24600    993   RPOT3_ARATH DNA-directed RNA polymerase 3, ch...254.9     35.4     48     76GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005739; C:mitochondrion; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:TAIR.
6Q8L6J5    1002   RPO1B_TOBAC DNA-directed RNA polymerase 1B, m...8693e-164     526     36     53GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
7Q93Y94    1002   RPOT1_NICSY DNA-directed RNA polymerase 1, mi...8691e-162     522     36     53GO:0005739; C:mitochondrion; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
8P92969    976   RPOT1_ARATH DNA-directed RNA polymerase 1, mi...7963e-158     509     37     55GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0048481; P:ovule development; IMP:TAIR.::GO:0009860; P:pollen tube growth; IMP:TAIR.
9Q8L6J3    1021   RPO2B_TOBAC DNA-directed RNA polymerase 2B, c...8081e-157     509     37     54GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
10P69242    977   RPOT3_NICSY DNA-directed RNA polymerase 3, ch...8744e-157     506     36     53GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
11P69243    977   RPO3A_TOBAC DNA-directed RNA polymerase 3A, c...8744e-157     506     36     53GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
12Q8VWF8    1020   RPOT2_NICSY DNA-directed RNA polymerase 2, ch...8081e-156     506     37     54GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005739; C:mitochondrion; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
13Q8L6J1    977   RPO3B_TOBAC DNA-directed RNA polymerase 3B, c...8736e-156     503     35     53GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
14O00411    1230   RPOM_HUMAN DNA-directed RNA polymerase, mitoc...6741e-141     471     39     54GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006391; P:transcription initiation from mitochondrial promoter; TAS:Reactome.
15Q8BKF1    1207   RPOM_MOUSE DNA-directed RNA polymerase, mitoc...8192e-137     459     34     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
16Q8L6J2    332   RPO2A_TOBAC DNA-directed RNA polymerase 2A OS...3442e-79     270     41     57
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
17P07659    884   RPOL_BPT3 DNA-directed RNA polymerase OS=Ente...8491e-58     223     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
18P18147    906   RPOL_BPK11 DNA-directed RNA polymerase OS=Ent...6204e-58     221     28     45
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
19P00573    883   RPOL_BPT7 DNA-directed RNA polymerase OS=Ente...8402e-56     216     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
20P06221    874   RPOL_BPSP6 DNA-directed RNA polymerase OS=Ent...7313e-49     193     26     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
21P33540    896   RPOP_NEUCS Probable DNA-directed RNA polymera...4489e-47     186     31     50GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
22P33541    811   RPOP_NEUIN Probable DNA-directed RNA polymera...6113e-37     155     25     45GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
23P33539    1102   RPOP_AGABT Probable DNA-directed RNA polymera...7691e-35     151     23     43GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
24Q8L6J4    155   RPO1A_TOBAC DNA-directed RNA polymerase 1A OS...1222e-34     135     50     70
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
25O03685    831   RPOP_GELSP Probable DNA-directed RNA polymera...5937e-33     141     24     44GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
26P22372    936   RPOP_CLAPU Probable DNA-directed RNA polymera...6089e-31     135     24     44GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
27Q01521    948   RPOP_PODAS Probable DNA-directed RNA polymera...1150.0006     48.1     27     51GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
28P10581    1098   RPOP_MAIZE Probable DNA-directed RNA polymera...4660.000000006     64.7     24     39GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
29Q03M88    943   IF2_STRTD Translation initiation factor IF-2 ...1634.4     35.4     28     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
30Q5M1B9    943   IF2_STRT1 Translation initiation factor IF-2 ...1634.6     35.4     28     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro.
31B3QLF7    251   RS2_CHLP8 30S ribosomal protein S2 OS=thiosul...1116.5     34.3     26     46GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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