Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Coccidiodis immitis H538.4
Locus:
CIHG_00023
Length:
369
Number of sequences:
10593
Description:
endoribonuclease ysh-1
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q58633    634   Y1236_METJA Uncharacterized protein MJ1236 OS...3071e-26     115     31     51
GO:0016787; F:hydrolase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
32Q60355    428   Y047_METJA Uncharacterized protein MJ0047 OS=...2982e-22     100     27     48
GO:0016787; F:hydrolase activity; IEA:InterPro.
33Q652P4    738   CPSF2_ORYSJ Cleavage and polyadenylation spec...2834e-22     101     25     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016787; F:hydrolase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
34Q9LKF9    739   CPSF2_ARATH Cleavage and polyadenylation spec...2531e-21     100     27     50GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; NAS:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0016787; F:hydrolase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0035194; P:posttranscriptional gene silencing by RNA; IMP:TAIR.
35Q5SLP1    431   RNSE_THET8 Ribonuclease TTHA0252 OS=Thermus t...3166e-19     90.9     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
36Q55BS1    784   CPSF2_DICDI Cleavage and polyadenylation spec...2271e-18     90.9     26     47GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:dictyBase.
GO:0016787; F:hydrolase activity; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:dictyBase.
GO:0006379; P:mRNA cleavage; ISS:dictyBase.::GO:0006378; P:mRNA polyadenylation; ISS:dictyBase.
37Q9V3D6    756   CPSF2_DROME Probable cleavage and polyadenyla...2709e-18     88.2     23     47GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:FlyBase.
GO:0016787; F:hydrolase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006398; P:histone mRNA 3'-end processing; IMP:FlyBase.::GO:0006379; P:mRNA cleavage; ISS:FlyBase.::GO:0006378; P:mRNA polyadenylation; IMP:FlyBase.
38Q9P2I0    782   CPSF2_HUMAN Cleavage and polyadenylation spec...2757e-17     85.5     24     45GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:UniProtKB.
GO:0016787; F:hydrolase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006398; P:histone mRNA 3'-end processing; IDA:UniProtKB.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
39Q10568    782   CPSF2_BOVIN Cleavage and polyadenylation spec...2758e-17     85.5     24     45GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0016787; F:hydrolase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006398; P:histone mRNA 3'-end processing; ISS:UniProtKB.
40O35218    782   CPSF2_MOUSE Cleavage and polyadenylation spec...2738e-17     85.5     25     45GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0016787; F:hydrolase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006398; P:histone mRNA 3'-end processing; ISS:UniProtKB.
41Q9W799    783   CPSF2_XENLA Cleavage and polyadenylation spec...2446e-16     82.8     25     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0016787; F:hydrolase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
42O74740    797   CFT2_SCHPO Cleavage factor two protein 2 OS=S...2300.000000000000001     81.6     26     46GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.
43A8XUS3    842   CPSF2_CAEBR Probable cleavage and polyadenyla...2600.00000000000001     79.3     24     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016787; F:hydrolase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
44O17403    843   CPSF2_CAEEL Probable cleavage and polyadenyla...2720.0000000000003     74.7     23     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016787; F:hydrolase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000910; P:cytokinesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0016246; P:RNA interference; IMP:WormBase.
45Q55470    554   Y514_SYNY3 Uncharacterized protein sll0514 OS...2080.00000000002     68.6     29     49
GO:0016787; F:hydrolase activity; IEA:InterPro.
46Q54SH0    712   INT9_DICDI Integrator complex subunit 9 homol...1710.000004     52.4     25     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
47Q8K114    658   INT9_MOUSE Integrator complex subunit 9 OS=Mu...2580.004     42.7     22     40
48B1ZZL9    1017   DNLI_OPITP Probable DNA ligase OS=Opitutus te...1270.005     42.7     28     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003910; F:DNA ligase (ATP) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
49Q4R5Z4    637   INT9_MACFA Integrator complex subunit 9 OS=Ma...2700.012     41.2     22     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
50Q2KJA6    658   INT9_BOVIN Integrator complex subunit 9 OS=Bo...2580.021     40.4     22     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
51Q9NV88    658   INT9_HUMAN Integrator complex subunit 9 OS=Ho...2700.03     40     21     40GO:0032039; C:integrator complex; IDA:HGNC.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0016180; P:snRNA processing; IDA:HGNC.
52Q9BQG0    1328   MBB1A_HUMAN Myb-binding protein 1A OS=Homo sa...800.14     38.1     30     55GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0042564; C:NLS-dependent protein nuclear import complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.::GO:0008134; F:transcription factor binding; TAS:ProtInc.
GO:0042149; P:cellular response to glucose starvation; IDA:UniProtKB.::GO:0006913; P:nucleocytoplasmic transport; ISS:UniProtKB.::GO:0071158; P:positive regulation of cell cycle arrest; IMP:UniProtKB.::GO:0072332; P:signal transduction by p53 class mediator resulting in induction of apoptosis; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
53Q5ZKK2    658   INT9_CHICK Integrator complex subunit 9 OS=Ga...2320.18     37.7     22     40
54Q6DFF4    658   INT9_XENLA Integrator complex subunit 9 OS=Xe...2400.22     37.4     21     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
55Q5QJC2    714   DCR1C_CHICK Protein artemis OS=Gallus gallus ...390.37     36.6     41     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
56Q5RGE5    639   DCR1C_DANRE Protein artemis OS=Danio rerio (Z...601.1     35     37     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
57Q6DRL5    1269   MBB1A_DANRE Myb-binding protein 1A-like prote...482     34.3     33     58GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
58Q9W1X4    1711   NU214_DROME Nuclear pore complex protein Nup2...642.5     34.3     36     50GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005643; C:nuclear pore; IMP:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000059; P:protein import into nucleus, docking; IDA:UniProtKB.::GO:0007184; P:SMAD protein import into nucleus; IMP:FlyBase.
records
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