| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | O13801 | 604 | YE04_SCHPO Uncharacterized RNA-binding protei... | 22 | 0.066 | 40.4 | 64 | 82 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 2 | P32770 | 719 | NRP1_YEAST Asparagine-rich protein OS=Sacchar... | 351 | 2e-66 | 239 | 43 | 57 | GO:0010494; C:cytoplasmic stress granule; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 3 | Q6DEZ7 | 687 | ESRP1_XENTR Epithelial splicing regulatory pr... | 141 | 0.00009 | 49.7 | 26 | 45 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 4 | Q6NXG1 | 681 | ESRP1_HUMAN Epithelial splicing regulatory pr... | 212 | 0.0003 | 48.1 | 23 | 40 | GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:HPA. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043484; P:regulation of RNA splicing; IDA:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 5 | Q8S9K3 | 758 | VAR3_ARATH Zinc finger protein VAR3, chloropl... | 41 | 0.13 | 39.3 | 29 | 66 | GO:0009570; C:chloroplast stroma; IDA:TAIR. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0009658; P:chloroplast organization; IMP:TAIR. | 6 | A0JMV4 | 833 | RBM5A_XENLA RNA-binding protein 5-A OS=Xenopu... | 36 | 0.001 | 45.8 | 53 | 61 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 7 | Q7ZY29 | 688 | ESRP1_XENLA Epithelial splicing regulatory pr... | 141 | 0.0006 | 47 | 24 | 45 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 8 | Q6DDU9 | 749 | RBM5B_XENLA RNA-binding protein 5-B OS=Xenopu... | 36 | 0.001 | 45.8 | 53 | 61 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 9 | A4IGK4 | 838 | RBM5_XENTR RNA-binding protein 5 OS=Xenopus t... | 36 | 0.001 | 46.2 | 53 | 61 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 10 | Q3US41 | 680 | ESRP1_MOUSE Epithelial splicing regulatory pr... | 148 | 0.001 | 46.2 | 25 | 41 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 11 | B2RYD2 | 677 | ESRP1_RAT Epithelial splicing regulatory prot... | 139 | 0.001 | 45.8 | 26 | 42 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 12 | Q1RMU5 | 815 | RBM5_BOVIN RNA-binding protein 5 OS=Bos tauru... | 26 | 0.071 | 40.4 | 50 | 65 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 13 | Q91YE7 | 815 | RBM5_MOUSE RNA-binding protein 5 OS=Mus muscu... | 26 | 0.08 | 40 | 50 | 65 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 14 | P52756 | 815 | RBM5_HUMAN RNA-binding protein 5 OS=Homo sapi... | 26 | 0.074 | 40.4 | 50 | 65 | GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; TAS:UniProtKB. | | | | | | | | | | GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0003729; F:mRNA binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0008285; P:negative regulation of cell proliferation; TAS:UniProtKB.::GO:0043065; P:positive regulation of apoptotic process; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; IDA:UniProtKB. | 15 | B2GV05 | 815 | RBM5_RAT RNA-binding protein 5 OS=Rattus norv... | 26 | 0.079 | 40 | 50 | 65 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 16 | Q6IP09 | 633 | PABPB_XENLA Polyadenylate-binding protein 1-B... | 127 | 0.016 | 42.4 | 28 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005844; C:polysome; ISS:UniProtKB. | | | | | | | | | | GO:0031370; F:eukaryotic initiation factor 4G binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.::GO:0043621; F:protein self-association; ISS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006412; P:translation; IEA:UniProtKB-KW. | 17 | Q8K0G8 | 717 | ESRP2_MOUSE Epithelial splicing regulatory pr... | 134 | 0.017 | 42.4 | 28 | 46 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 18 | B2RYJ8 | 716 | ESRP2_RAT Epithelial splicing regulatory prot... | 134 | 0.02 | 42 | 28 | 46 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 19 | Q99KG3 | 930 | RBM10_MOUSE RNA-binding protein 10 OS=Mus mus... | 36 | 0.063 | 40.4 | 42 | 50 | GO:0016585; C:chromatin remodeling complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 20 | P98175 | 930 | RBM10_HUMAN RNA-binding protein 10 OS=Homo sa... | 36 | 0.061 | 40.4 | 42 | 50 | GO:0016585; C:chromatin remodeling complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 21 | P70501 | 852 | RBM10_RAT RNA-binding protein 10 OS=Rattus no... | 36 | 0.068 | 40.4 | 42 | 50 | GO:0016585; C:chromatin remodeling complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 22 | Q9VH90 | 778 | TRBID_DROME Ubiquitin thioesterase trabid OS=... | 32 | 0.31 | 38.1 | 44 | 56 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008234; F:cysteine-type peptidase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004221; F:ubiquitin thiolesterase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030177; P:positive regulation of Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0070536; P:protein K63-linked deubiquitination; ISS:UniProtKB.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW. | 23 | Q9BXU3 | 409 | TX13A_HUMAN Testis-expressed sequence 13A pro... | 24 | 0.15 | 38.9 | 58 | 58 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 24 | A1L1G1 | 714 | ESRP1_DANRE Epithelial splicing regulatory pr... | 139 | 0.19 | 38.9 | 22 | 43 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 25 | Q08BH5 | 510 | RBM46_DANRE Probable RNA-binding protein 46 O... | 98 | 0.22 | 38.5 | 30 | 44 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 26 | P49790 | 1475 | NU153_HUMAN Nuclear pore complex protein Nup1... | 31 | 1.8 | 35.8 | 42 | 52 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005643; C:nuclear pore; TAS:ProtInc.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005215; F:transporter activity; TAS:ProtInc. | | | | | | | | | | GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 27 | Q27294 | 399 | CAZ_DROME RNA-binding protein cabeza OS=Droso... | 26 | 0.62 | 37 | 54 | 62 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0008344; P:adult locomotory behavior; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase. | 28 | Q923K9 | 594 | A1CF_RAT APOBEC1 complementation factor OS=Ra... | 93 | 0.78 | 37 | 30 | 43 | GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; ISS:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0005720; C:nuclear heterochromatin; IDA:RGD. | | | | | | | | | | GO:0004131; F:cytosine deaminase activity; IDA:RGD.::GO:0003729; F:mRNA binding; IDA:RGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003727; F:single-stranded RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0016554; P:cytidine to uridine editing; TAS:HGNC.::GO:0016556; P:mRNA modification; IMP:RGD.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; ISS:UniProtKB. | 29 | Q5YD48 | 595 | A1CF_MOUSE APOBEC1 complementation factor OS=... | 93 | 0.9 | 36.6 | 30 | 43 | GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; ISS:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003727; F:single-stranded RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0016554; P:cytidine to uridine editing; TAS:HGNC.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; ISS:UniProtKB. | 30 | Q5R9H4 | 587 | A1CF_PONAB APOBEC1 complementation factor OS=... | 93 | 1.2 | 36.2 | 30 | 44 | GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; ISS:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003727; F:single-stranded RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; ISS:UniProtKB. | 31 | Q9NQ94 | 594 | A1CF_HUMAN APOBEC1 complementation factor OS=... | 93 | 1.2 | 36.2 | 30 | 44 | GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; IDA:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003727; F:single-stranded RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0016554; P:cytidine to uridine editing; TAS:Reactome.::GO:0016556; P:mRNA modification; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; IDA:UniProtKB. |
