Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Candida albicans WO1
Locus:
CAWG_00308
Length:
363
Number of sequences:
5931
Description:
pre-mRNA splicing factor CWC2
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91O60506    623   HNRPQ_HUMAN Heterogeneous nuclear ribonucleop...830.39     36.6     34     55GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0070937; C:CRD-mediated mRNA stability complex; IDA:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0071204; C:histone pre-mRNA 3'end processing complex; ISS:UniProtKB.::GO:0005792; C:microsome; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0070934; P:CRD-mediated mRNA stabilization; IMP:UniProtKB.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
92Q93W34    415   RP45C_ARATH Polyadenylate-binding protein RBP...810.49     35.8     30     48GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
93Q20870    499   DAZ1_CAEEL DAZ protein 1 OS=Caenorhabditis el...540.53     35.8     35     61GO:0005737; C:cytoplasm; IDA:WormBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
94Q24207    228   BOULE_DROME Protein boule OS=Drosophila melan...540.61     35     37     56GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0043204; C:perikaryon; IDA:FlyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IMP:UniProtKB.
GO:0007140; P:male meiosis; IMP:FlyBase.::GO:0008315; P:meiotic G2/MI transition; IMP:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IGI:FlyBase.::GO:0048137; P:spermatocyte division; IMP:UniProtKB.
95Q0V9L3    424   CELF4_XENTR CUGBP Elav-like family member 4 O...631.7     34.3     32     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.
96P40567    111   MSL1_YEAST U2 small nuclear ribonucleoprotein...610.76     33.5     38     59GO:0005686; C:U2 snRNP; TAS:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030620; F:U2 snRNA binding; IPI:SGD.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
97Q75K81    703   C3H36_ORYSJ Zinc finger CCCH domain-containin...770.82     35.4     30     45
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
98P49960    444   PRP24_YEAST U4/U6 snRNA-associated-splicing f...831.1     35     30     53GO:0005688; C:U6 snRNP; IDA:SGD.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017070; F:U6 snRNA binding; IDA:SGD.
GO:0000244; P:assembly of spliceosomal tri-snRNP; IDA:SGD.::GO:0000245; P:spliceosomal complex assembly; IMP:SGD.
99P32588    453   PUB1_YEAST Nuclear and cytoplasmic polyadenyl...801.2     34.7     33     43GO:0010494; C:cytoplasmic stress granule; IDA:SGD.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; IDA:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IDA:SGD.::GO:0043488; P:regulation of mRNA stability; IMP:SGD.::GO:0034063; P:stress granule assembly; IMP:SGD.
100Q9SAB3    405   RB45B_ARATH Polyadenylate-binding protein RBP...1161.4     34.7     26     42GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0010193; P:response to ozone; IEP:TAIR.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
101Q93618    374   ZC3HF_CAEEL Zinc finger CCCH domain-containin...221.8     34.3     45     73
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
102Q8JFQ4    277   RDM1_CHICK RAD52 motif-containing protein 1 O...1432.1     33.9     29     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0043169; F:cation binding; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.
103B0F0H3    409   MKRN2_XENLA Probable E3 ubiquitin-protein lig...392.1     33.9     38     56GO:0005622; C:intracellular; IC:UniProtKB.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009798; P:axis specification; IMP:BHF-UCL.::GO:0009790; P:embryo development; IMP:UniProtKB.::GO:0050768; P:negative regulation of neurogenesis; IMP:UniProtKB.::GO:0014065; P:phosphatidylinositol 3-kinase cascade; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0043491; P:protein kinase B signaling cascade; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IDA:UniProtKB.
104Q6GLD9    418   MKRN2_XENTR Probable E3 ubiquitin-protein lig...392.2     33.9     36     56
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009798; P:axis specification; ISS:BHF-UCL.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0050768; P:negative regulation of neurogenesis; ISS:UniProtKB.::GO:0014065; P:phosphatidylinositol 3-kinase cascade; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0043491; P:protein kinase B signaling cascade; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; ISS:UniProtKB.
105Q4W9V0    383   SLT11_ASPFU Pre-mRNA-splicing factor slt11 OS...742.7     33.5     26     46GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
106Q7UJ58    1083   CARB_RHOBA Carbamoyl-phosphate synthase large...822.7     33.9     26     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004088; F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006526; P:arginine biosynthetic process; IEA:UniProtKB-KW.::GO:0006221; P:pyrimidine nucleotide biosynthetic process; IEA:UniProtKB-KW.
107Q49Y56    876   SYA_STAS1 Alanine--tRNA ligase OS=DSM 20229)....913.1     33.5     34     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004813; F:alanine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006419; P:alanyl-tRNA aminoacylation; IEA:InterPro.
108Q9TT91    478   MKRN1_MACEU E3 ubiquitin-protein ligase makor...283.2     33.5     36     64
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
109Q7JWR9    404   ZC3HF_DROME Zinc finger CCCH domain-containin...253.6     33.1     44     64
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
110Q6GG85    876   SYA_STAAR Alanine--tRNA ligase OS=Staphylococ...924.4     33.1     33     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004813; F:alanine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006419; P:alanyl-tRNA aminoacylation; IEA:InterPro.
111Q6P158    1386   DHX57_HUMAN Putative ATP-dependent RNA helica...234.9     33.1     48     70
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
112Q803J8    433   ZC3HF_DANRE Zinc finger CCCH domain-containin...495.8     32.7     35     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
113Q10422    297   YDC1_SCHPO Uncharacterized RNA-binding protei...1145.8     32.3     25     42GO:0005634; C:nucleus; IDA:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
114Q5Z807    390   C3H46_ORYSJ Zinc finger CCCH domain-containin...237.3     32.3     48     61
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
115Q8WU90    426   ZC3HF_HUMAN Zinc finger CCCH domain-containin...287.4     32.3     39     61GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
116Q9FPJ8    387   RB45A_ARATH Polyadenylate-binding protein RBP...637.6     32     30     48GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
117Q3TIV5    426   ZC3HF_MOUSE Zinc finger CCCH domain-containin...287.7     32.3     39     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0019221; P:cytokine-mediated signaling pathway; IDA:MGI.
118Q6U6G5    426   ZC3HF_RAT Zinc finger CCCH domain-containing ...288.3     32     39     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
119P67011    876   SYA_STAAN Alanine--tRNA ligase OS=Staphylococ...928.5     32.3     32     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004813; F:alanine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006419; P:alanyl-tRNA aminoacylation; IEA:InterPro.
120P67010    876   SYA_STAAM Alanine--tRNA ligase OS=Staphylococ...928.5     32.3     32     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004813; F:alanine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006419; P:alanyl-tRNA aminoacylation; IEA:InterPro.
121A5ITE3    876   SYA_STAA9 Alanine--tRNA ligase OS=Staphylococ...928.5     32.3     32     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004813; F:alanine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006419; P:alanyl-tRNA aminoacylation; IEA:InterPro.
records
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