Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Candida albicans WO1
Locus:
CAWG_00175
Length:
912
Number of sequences:
5931
Description:
hypothetical protein similar to RNA splicing factor
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P19735    899   PRP6_YEAST Pre-mRNA-splicing factor 6 OS=Sacc...9352e-143     455     33     53GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
2Q12381    906   PRP1_SCHPO Pre-mRNA-splicing factor prp1 OS=S...9376e-136     436     32     54GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0005488; F:binding; IEA:InterPro.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IMP:PomBase.
3A1A5S1    941   PRP6_RAT Pre-mRNA-processing factor 6 OS=Ratt...9744e-117     386     28     51GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
4O94906    941   PRP6_HUMAN Pre-mRNA-processing factor 6 OS=Ho...9736e-117     386     28     51GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0071001; C:U4/U6 snRNP; IDA:BHF-UCL.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:BHF-UCL.::GO:0005682; C:U5 snRNP; IDA:BHF-UCL.
GO:0050681; F:androgen receptor binding; IPI:MGI.::GO:0043021; F:ribonucleoprotein complex binding; IDA:BHF-UCL.::GO:0003713; F:transcription coactivator activity; IGI:MGI.
GO:0000244; P:assembly of spliceosomal tri-snRNP; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0000245; P:spliceosomal complex assembly; NAS:UniProtKB.
5Q91YR7    941   PRP6_MOUSE Pre-mRNA-processing factor 6 OS=Mu...9741e-116     385     28     51GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
6Q2KJJ0    941   PRP6_BOVIN Pre-mRNA-processing factor 6 OS=Bo...9721e-114     379     28     51GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
7Q5RCC2    941   PRP6_PONAB Pre-mRNA-processing factor 6 OS=Po...9733e-114     379     28     50GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
8Q527H0    691   CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=b...693.8     35     23     57GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
9P0CO10    726   CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=A...710.21     38.9     28     55GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
10P0CO11    726   CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=(...710.21     38.9     28     55GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
11Q4WT84    676   CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=A...3446.4     34.3     19     42GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
12Q7SGD2    695   CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=...978.1     33.9     24     47GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
13P87312    674   CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=S...921.6     36.2     25     45GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase.
14Q9HF03    724   CLF1_CRYNV Pre-mRNA-splicing factor CLF1 OS=g...710.19     39.3     28     55GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
15Q5BDX1    673   CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=1...1427.2     33.9     22     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
16Q5K654    677   CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=P...7110     33.5     23     51GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
17P63155    690   CRNL1_RAT Crooked neck-like protein 1 OS=Ratt...793.8     35     27     52
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB.
18P63154    690   CRNL1_MOUSE Crooked neck-like protein 1 OS=Mu...793.8     35     27     52GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB.
19Q6CJK2    684   CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=1...750.78     37.4     29     52GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
20Q4PB37    781   CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=U...1091.2     36.6     24     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
21Q54VF4    1304   Y8236_DICDI TPR-containing protein DDB_G02803...2140.51     38.1     21     46GO:0005622; C:intracellular; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.
GO:0006396; P:RNA processing; IEA:InterPro.
22Q12309    687   CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=S...1250.016     42.7     26     51GO:0000785; C:chromatin; IDA:SGD.::GO:0000974; C:Prp19 complex; IDA:SGD.::GO:0071006; C:U2-type catalytic step 1 spliceosome; IDA:SGD.::GO:0071007; C:U2-type catalytic step 2 spliceosome; IDA:SGD.::GO:0071008; C:U2-type post-mRNA release spliceosomal complex; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003688; F:DNA replication origin binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000354; P:cis assembly of pre-catalytic spliceosome; IMP:SGD.::GO:0006270; P:DNA-dependent DNA replication initiation; IMP:SGD.
23Q9BZJ0    848   CRNL1_HUMAN Crooked neck-like protein 1 OS=Ho...794.2     35     27     52GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IDA:UniProtKB.
GO:0000245; P:spliceosomal complex assembly; IDA:UniProtKB.
24Q6BSP7    714   CLF1_DEBHA Pre-mRNA-splicing factor CLF1 OS=0...560.19     39.3     34     55GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
25P17886    702   CRN_DROME Protein crooked neck OS=Drosophila ...4570.035     41.6     20     39GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005813; C:centrosome; IDA:FlyBase.::GO:0072686; C:mitotic spindle; IDA:FlyBase.::GO:0016607; C:nuclear speck; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
GO:0005488; F:binding; IEA:InterPro.
GO:0008366; P:axon ensheathment; IMP:FlyBase.::GO:0051298; P:centrosome duplication; IMP:FlyBase.::GO:0008347; P:glial cell migration; IMP:FlyBase.::GO:0007443; P:Malpighian tubule morphogenesis; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0007438; P:oenocyte development; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.
26Q5AED6    758   CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=C...1211.7     36.2     20     43GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
27Q9FNS4    662   MBB1_CHLRE PsbB mRNA maturation factor Mbb1, ...1370.35     38.1     21     45GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
28O60188    488   UTP6_SCHPO U3 small nucleolar RNA-associated ...930.12     39.7     28     48GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
29Q4KLU2    641   PRP39_XENLA Pre-mRNA-processing factor 39 OS=...1660.22     38.9     25     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
30Q6C186    676   CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=l...743.1     35.4     24     53GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
31Q6PID6    262   TTC33_HUMAN Tetratricopeptide repeat protein ...890.5     37     33     45
GO:0005488; F:binding; IEA:InterPro.
records
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