Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Candida albicans WO1
Locus:
CAWG_00175
Length:
912
Number of sequences:
5931
Description:
hypothetical protein similar to RNA splicing factor
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q6PID6    262   TTC33_HUMAN Tetratricopeptide repeat protein ...890.5     37     33     45
GO:0005488; F:binding; IEA:InterPro.
32Q02354    440   UTP6_YEAST U3 small nucleolar RNA-associated ...630.6     37.4     32     49GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
33Q54WN5    609   UTP6_DICDI U3 small nucleolar RNA-associated ...880.64     37.4     32     55GO:0005813; C:centrosome; IDA:dictyBase.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:dictyBase.
GO:0030515; F:snoRNA binding; ISS:dictyBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:dictyBase.
34Q1JPZ7    752   PRP39_DANRE Pre-mRNA-processing factor 39 OS=...870.71     37.4     30     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
35Q6FW76    695   CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=N...877.3     33.9     28     52GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
36Q9D6K7    262   TTC33_MOUSE Tetratricopeptide repeat protein ...1210.85     36.6     27     43
GO:0005488; F:binding; IEA:InterPro.
37Q54XP4    705   CRNL1_DICDI Crooked neck-like protein 1 OS=Di...5322.6     35.4     22     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB.
38Q2UKV8    1078   RNA14_ASPOR mRNA 3'-end-processing protein rn...621.1     36.6     31     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
39Q6DFB8    1564   TTC37_XENLA Tetratricopeptide repeat protein ...891.5     36.6     27     48GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
40Q4WXX4    1029   RNA14_ASPFU mRNA 3'-end-processing protein rn...621.7     36.2     31     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
41Q7KRW8    1066   PRP39_DROME Pre-mRNA-processing factor 39 OS=...1131.9     36.2     27     44GO:0005685; C:U1 snRNP; ISS:FlyBase.
GO:0031072; F:heat shock protein binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.
42Q750X3    683   CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Y...692.6     35.4     23     52GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
43Q5T4D3    741   TMTC4_HUMAN Transmembrane and TPR repeat-cont...2763     35.4     22     41GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
44Q5UQ99    470   YL537_MIMIV Uncharacterized protein L537 OS=A...1113     35     28     50
45O60293    1989   ZC3H1_HUMAN Zinc finger C3H1 domain-containin...834.2     35     24     47GO:0005622; C:intracellular; IEA:InterPro.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006396; P:RNA processing; IEA:InterPro.
46Q5B3I8    1075   RNA14_EMENI mRNA 3'-end-processing protein rn...624.3     35     31     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
47Q58741    314   Y1345_METJA TPR repeat-containing protein MJ1...1624.3     34.3     21     44
GO:0005488; F:binding; IEA:InterPro.
48Q86UA1    669   PRP39_HUMAN Pre-mRNA-processing factor 39 OS=...854.3     34.7     26     40GO:0005634; C:nucleus; IDA:HPA.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
49Q3UV71    942   TMTC1_MOUSE Transmembrane and TPR repeat-cont...1754.3     34.7     22     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005739; C:mitochondrion; IDA:MGI.
GO:0005488; F:binding; IEA:InterPro.
50Q8C7N7    257   APH1B_MOUSE Gamma-secretase subunit APH-1B OS...544.6     33.9     37     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0004175; F:endopeptidase activity; IGI:MGI.
GO:0007219; P:Notch signaling pathway; IEA:UniProtKB-KW.::GO:0043085; P:positive regulation of catalytic activity; IEA:InterPro.::GO:0016485; P:protein processing; IEA:InterPro.
51A2A791    1549   ZMYM4_MOUSE Zinc finger MYM-type protein 4 OS...615.4     34.7     31     56
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0022604; P:regulation of cell morphogenesis; ISS:UniProtKB.
52Q8K2Z2    665   PRP39_MOUSE Pre-mRNA-processing factor 39 OS=...856.1     34.3     26     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
53Q8VAK2    641   UB403_WSSVS RING finger containing E3 ubiquit...656.9     33.9     32     60
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.
54Q0C161    579   SYM_HYPNA Methionine--tRNA ligase OS=Hyphomon...906.9     33.9     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004825; F:methionine-tRNA ligase activity; IEA:EC.
GO:0006431; P:methionyl-tRNA aminoacylation; IEA:InterPro.
records
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