rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
91 | Q9WX39 | 105 | RBPF_NOSS1 Putative RNA-binding protein rbpF ... | 52 | 0.001 | 42.7 | 33 | 63 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 92 | D4AE41 | 388 | RMXL1_RAT RNA binding motif protein, X-linked... | 80 | 0.001 | 45.1 | 31 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 93 | O23212 | 573 | U2A2A_ARATH Splicing factor U2af large subuni... | 70 | 0.001 | 45.4 | 31 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042742; P:defense response to bacterium; IEP:TAIR.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 94 | Q9FPJ8 | 387 | RB45A_ARATH Polyadenylate-binding protein RBP... | 72 | 0.001 | 45.1 | 32 | 57 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 95 | O74362 | 334 | ESF2_SCHPO Pre-rRNA-processing protein esf2 O... | 198 | 0.001 | 45.1 | 27 | 45 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; ISS:PomBase. | 96 | P97379 | 482 | G3BP2_MOUSE Ras GTPase-activating protein-bin... | 57 | 0.001 | 45.1 | 32 | 61 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 97 | P27476 | 414 | NSR1_YEAST Nuclear localization sequence-bind... | 84 | 0.001 | 45.1 | 27 | 46 | GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005730; C:nucleolus; TAS:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0003697; F:single-stranded DNA binding; IDA:SGD. | | | | | | | | | | GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0000028; P:ribosomal small subunit assembly; TAS:SGD.::GO:0006364; P:rRNA processing; TAS:SGD. | 98 | Q9CZ96 | 217 | ZCRB1_MOUSE Zinc finger CCHC-type and RNA-bin... | 72 | 0.001 | 43.9 | 26 | 54 | GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005689; C:U12-type spliceosomal complex; ISS:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 99 | Q5R9L3 | 482 | G3BP2_PONAB Ras GTPase-activating protein-bin... | 57 | 0.001 | 45.1 | 32 | 61 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW. | 100 | Q9UN86 | 482 | G3BP2_HUMAN Ras GTPase-activating protein-bin... | 57 | 0.001 | 45.1 | 32 | 61 | GO:0005829; C:cytosol; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030159; F:receptor signaling complex scaffold activity; NAS:UniProtKB.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0007253; P:cytoplasmic sequestering of NF-kappaB; NAS:UniProtKB.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0007265; P:Ras protein signal transduction; NAS:UniProtKB.::GO:0051056; P:regulation of small GTPase mediated signal transduction; TAS:Reactome. | 101 | Q499V6 | 217 | ZCRB1_RAT Zinc finger CCHC-type and RNA-bindi... | 72 | 0.001 | 43.9 | 26 | 54 | GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 102 | Q60990 | 380 | RBY1B_MOUSE RNA-binding motif protein, Y chro... | 80 | 0.001 | 44.7 | 29 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 103 | Q9LEB3 | 428 | RBP47_NICPL Polyadenylate-binding protein RBP... | 73 | 0.001 | 45.1 | 27 | 58 | GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0034605; P:cellular response to heat; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 104 | B0BNE4 | 269 | EPAB2_RAT Embryonic polyadenylate-binding pro... | 83 | 0.001 | 44.3 | 34 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 105 | A6NDY0 | 278 | EPAB2_HUMAN Embryonic polyadenylate-binding p... | 72 | 0.001 | 44.3 | 29 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 106 | Q1DXH0 | 768 | PABP_COCIM Polyadenylate-binding protein, cyt... | 81 | 0.001 | 45.1 | 30 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 107 | Q98SJ2 | 360 | DAZP1_XENLA DAZ-associated protein 1 OS=Xenop... | 55 | 0.007 | 42.4 | 35 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW. | 108 | Q29RT0 | 396 | RBMX_BOVIN RNA-binding motif protein, X chrom... | 80 | 0.002 | 44.7 | 30 | 55 | GO:0071013; C:catalytic step 2 spliceosome; ISS:UniProtKB.::GO:0070062; C:extracellular vesicular exosome; ISS:UniProtKB.::GO:0005719; C:nuclear euchromatin; ISS:UniProtKB. | | | | | | | | | | GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0001047; F:core promoter binding; ISS:UniProtKB.::GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0071347; P:cellular response to interleukin-1; ISS:UniProtKB.::GO:0006509; P:membrane protein ectodomain proteolysis; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0051260; P:protein homooligomerization; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 109 | Q9ZR39 | 555 | U2A2A_NICPL Splicing factor U2af large subuni... | 66 | 0.002 | 44.7 | 32 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 110 | Q16560 | 246 | U1SBP_HUMAN U11/U12 small nuclear ribonucleop... | 48 | 0.002 | 43.9 | 42 | 67 | GO:0005689; C:U12-type spliceosomal complex; IDA:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IC:HGNC. | 111 | Q22037 | 346 | ROA1_CAEEL Heterogeneous nuclear ribonucleopr... | 104 | 8.4 | 32.7 | 27 | 50 | GO:0000781; C:chromosome, telomeric region; IDA:WormBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0031581; P:hemidesmosome assembly; IGI:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040015; P:negative regulation of multicellular organism growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase. | 112 | Q5AJS6 | 841 | MRD1_CANAL Multiple RNA-binding domain-contai... | 77 | 0.002 | 44.7 | 25 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 113 | Q9DDY9 | 296 | PAB2A_XENLA Polyadenylate-binding protein 2-A... | 85 | 0.002 | 43.9 | 32 | 49 | GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 114 | O35698 | 380 | RBY1A_MOUSE RNA-binding motif protein, Y chro... | 80 | 0.002 | 44.3 | 29 | 55 | GO:0005634; C:nucleus; IDA:MGI. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 115 | Q1LZH0 | 245 | U1SBP_BOVIN U11/U12 small nuclear ribonucleop... | 48 | 0.002 | 43.5 | 42 | 67 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 116 | Q6DRC4 | 293 | EIF3G_DANRE Eukaryotic translation initiation... | 76 | 0.002 | 43.9 | 30 | 57 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 117 | Q5U1W5 | 244 | U1SBP_RAT U11/U12 small nuclear ribonucleopro... | 48 | 0.002 | 43.5 | 42 | 67 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 118 | Q02926 | 471 | RB97D_DROME Ribonucleoprotein RB97D OS=Drosop... | 47 | 0.002 | 44.3 | 38 | 64 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007286; P:spermatid development; IMP:FlyBase. | 119 | Q925G0 | 155 | RBM3_RAT Putative RNA-binding protein 3 OS=Ra... | 83 | 0.002 | 42.4 | 29 | 52 | GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0030425; C:dendrite; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045727; P:positive regulation of translation; IDA:UniProtKB. | 120 | Q9D384 | 244 | U1SBP_MOUSE U11/U12 small nuclear ribonucleop... | 48 | 0.003 | 43.1 | 42 | 67 | GO:0005689; C:U12-type spliceosomal complex; ISS:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 121 | Q15415 | 496 | RBY1F_HUMAN RNA-binding motif protein, Y chro... | 124 | 0.003 | 43.9 | 28 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; NAS:UniProtKB. |