| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
61 | P0CQ09 | 1183 | PAN2_CRYNB PAB-dependent poly(A)-specific rib... | 194 | 0.000000008 | 60.5 | 28 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 62 | Q2GSV2 | 1102 | PAN2_CHAGB PAB-dependent poly(A)-specific rib... | 154 | 0.00000001 | 59.7 | 31 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 63 | Q0UPL5 | 1129 | PAN2_PHANO PAB-dependent poly(A)-specific rib... | 158 | 0.00000001 | 59.7 | 30 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 64 | Q12090 | 404 | REXO3_YEAST RNA exonuclease 3 OS=Saccharomyce... | 157 | 0.00000003 | 58.2 | 31 | 50 | GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IMP:SGD.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0043628; P:ncRNA 3'-end processing; IMP:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 65 | Q6IE70 | 1205 | PAN2_RAT PAB-dependent poly(A)-specific ribon... | 154 | 0.00000003 | 58.9 | 28 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 66 | Q8BGF7 | 1200 | PAN2_MOUSE PAB-dependent poly(A)-specific rib... | 154 | 0.00000003 | 58.9 | 28 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 67 | Q504Q3 | 1202 | PAN2_HUMAN PAB-dependent poly(A)-specific rib... | 154 | 0.00000004 | 58.5 | 28 | 46 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; TAS:Reactome.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 68 | P0C581 | 1236 | PAN2_NEUCR PAB-dependent poly(A)-specific rib... | 156 | 0.00000006 | 57.8 | 28 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 69 | Q5F450 | 1197 | PAN2_CHICK PAB-dependent poly(A)-specific rib... | 154 | 0.00000007 | 57.8 | 27 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 70 | Q5B367 | 638 | REXO3_EMENI RNA exonuclease 3 OS=194 / M139) ... | 192 | 0.00000008 | 57.4 | 31 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 71 | Q6C462 | 1008 | PAN2_YARLI PAB-dependent poly(A)-specific rib... | 153 | 0.0000001 | 57 | 24 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 72 | Q6BZ78 | 1124 | PAN2_DEBHA PAB-dependent poly(A)-specific rib... | 176 | 0.0000004 | 55.5 | 28 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 73 | A3LRV8 | 1183 | PAN2_PICST PAB-dependent poly(A)-specific rib... | 186 | 0.0000005 | 55.1 | 28 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 74 | P53015 | 1131 | YPO4_CAEEL Uncharacterized protein F31E3.4 OS... | 176 | 0.000002 | 53.5 | 27 | 46 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0004527; F:exonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 75 | Q09798 | 1088 | PAN2_SCHPO PAB-dependent poly(A)-specific rib... | 145 | 0.000002 | 53.1 | 30 | 44 | GO:0031251; C:PAN complex; ISS:PomBase. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; ISS:PomBase.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; ISS:PomBase.::GO:0006301; P:postreplication repair; ISS:PomBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 76 | A5E1W0 | 1234 | PAN2_LODEL PAB-dependent poly(A)-specific rib... | 132 | 0.000002 | 53.1 | 27 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 77 | Q5BBL5 | 1154 | PAN2_EMENI PAB-dependent poly(A)-specific rib... | 162 | 0.000009 | 50.8 | 28 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 78 | A1A5R7 | 754 | REXON_RAT Putative RNA exonuclease NEF-sp OS=... | 160 | 0.00001 | 50.8 | 27 | 46 | | | | | | | | | | | GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 79 | A1CEK7 | 1161 | PAN2_ASPCL PAB-dependent poly(A)-specific rib... | 160 | 0.00002 | 50.1 | 28 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 80 | Q4WYA1 | 645 | REXO3_ASPFU RNA exonuclease 3 OS=A1100) (Aspe... | 199 | 0.00002 | 49.7 | 29 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 81 | P54394 | 931 | DING_BACSU Probable ATP-dependent helicase di... | 93 | 0.00003 | 49.3 | 25 | 52 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:InterPro.::GO:0004527; F:exonuclease activity; IEA:InterPro. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:InterPro. | 82 | Q4WHP6 | 1155 | PAN2_ASPFU PAB-dependent poly(A)-specific rib... | 160 | 0.00003 | 49.3 | 27 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 83 | A1DFN6 | 1161 | PAN2_NEOFI PAB-dependent poly(A)-specific rib... | 160 | 0.00004 | 49.3 | 27 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 84 | Q2ULU6 | 1155 | PAN2_ASPOR PAB-dependent poly(A)-specific rib... | 160 | 0.00009 | 47.8 | 27 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 85 | Q0CJU7 | 1159 | PAN2_ASPTN PAB-dependent poly(A)-specific rib... | 160 | 0.00009 | 47.8 | 28 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 86 | A2QW83 | 1150 | PAN2_ASPNC PAB-dependent poly(A)-specific rib... | 160 | 0.0001 | 47.8 | 28 | 46 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004535; F:poly(A)-specific ribonuclease activity; IEA:EC.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IEA:InterPro. | 87 | Q48R90 | 1465 | DPO3_STRPM DNA polymerase III polC-type OS=St... | 171 | 0.0004 | 45.8 | 22 | 41 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006260; P:DNA replication; IEA:UniProtKB-KW. | 88 | Q1JEV4 | 1465 | DPO3_STRPD DNA polymerase III polC-type OS=St... | 202 | 0.002 | 43.9 | 23 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006260; P:DNA replication; IEA:UniProtKB-KW. | 89 | A2RGI3 | 1465 | DPO3_STRPG DNA polymerase III polC-type OS=St... | 171 | 0.003 | 43.1 | 21 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006260; P:DNA replication; IEA:UniProtKB-KW. | 90 | Q1JJW3 | 1465 | DPO3_STRPC DNA polymerase III polC-type OS=St... | 171 | 0.003 | 43.1 | 21 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006260; P:DNA replication; IEA:UniProtKB-KW. | 91 | Q1J9R4 | 1465 | DPO3_STRPB DNA polymerase III polC-type OS=St... | 171 | 0.003 | 43.1 | 21 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006260; P:DNA replication; IEA:UniProtKB-KW. |
