Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Blastomyces dermatitidis LH 1408.1
Locus:
BDBG_00103
Length:
510
Number of sequences:
9555
Description:
ribonucleoprotein
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
301B4M205    154   NCB2A_DROVI Nuclear cap-binding protein subun...750.091     37.4     28     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
302Q9V535    165   RBM8A_DROME RNA-binding protein 8A OS=Drosoph...1050.00009     46.6     28     53GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0035145; C:exon-exon junction complex; IPI:FlyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007173; P:epidermal growth factor receptor signaling pathway; IMP:FlyBase.::GO:0046595; P:establishment of pole plasm mRNA localization; TAS:FlyBase.::GO:0000226; P:microtubule cytoskeleton organization; IMP:FlyBase.::GO:0006406; P:mRNA export from nucleus; NAS:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0007312; P:oocyte nucleus migration involved in oocyte dorsal/ventral axis specification; IMP:FlyBase.::GO:0045451; P:pole plasm oskar mRNA localization; TAS:FlyBase.::GO:0007317; P:regulation of pole plasm oskar mRNA localization; IMP:FlyBase.
303O04425    747   FCA_ARATH Flowering time control protein FCA ...1930.00000002     60.8     26     48GO:0000785; C:chromatin; TAS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031048; P:chromatin silencing by small RNA; IMP:TAIR.::GO:0009790; P:embryo development; IGI:TAIR.::GO:0009553; P:embryo sac development; IGI:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0009909; P:regulation of flower development; IMP:TAIR.
304B4QV17    154   NCBP2_DROSI Nuclear cap-binding protein subun...750.17     36.6     28     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
305B4IBA4    154   NCBP2_DROSE Nuclear cap-binding protein subun...750.17     36.6     28     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
306Q9V3L6    154   NCBP2_DROME Nuclear cap-binding protein subun...750.17     36.6     28     48GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0000339; F:RNA cap binding; ISS:FlyBase.
GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0045071; P:negative regulation of viral genome replication; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0031053; P:primary miRNA processing; IMP:UniProtKB.::GO:0030422; P:production of siRNA involved in RNA interference; IMP:FlyBase.
307Q29RT0    396   RBMX_BOVIN RNA-binding motif protein, X chrom...720.00004     49.7     32     58GO:0071013; C:catalytic step 2 spliceosome; ISS:UniProtKB.::GO:0070062; C:extracellular vesicular exosome; ISS:UniProtKB.::GO:0005719; C:nuclear euchromatin; ISS:UniProtKB.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0001047; F:core promoter binding; ISS:UniProtKB.::GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0071347; P:cellular response to interleukin-1; ISS:UniProtKB.::GO:0006509; P:membrane protein ectodomain proteolysis; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0051260; P:protein homooligomerization; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
308Q9ZR40    573   U2A2B_NICPL Splicing factor U2af large subuni...680.14     38.5     29     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
309O43040    363   CTF1_SCHPO Cleavage and termination factor 1 ...770.0000002     56.6     31     57GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006378; P:mRNA polyadenylation; IC:PomBase.
310B3P0D7    154   NCBP2_DROER Nuclear cap-binding protein subun...750.033     38.9     29     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
311O75526    392   RMXL2_HUMAN RNA-binding motif protein, X-link...720.00004     49.7     33     60GO:0005634; C:nucleus; IDA:HPA.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
312P30352    221   SRSF2_CHICK Serine/arginine-rich splicing fac...760.003     42.7     25     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
313Q28BZ1    174   RBM8A_XENTR RNA-binding protein 8A OS=Xenopus...840.004     41.6     30     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
314P52756    815   RBM5_HUMAN RNA-binding protein 5 OS=Homo sapi...550.073     39.7     25     62GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; TAS:UniProtKB.
GO:0003677; F:DNA binding; TAS:ProtInc.::GO:0003729; F:mRNA binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0008285; P:negative regulation of cell proliferation; TAS:UniProtKB.::GO:0043065; P:positive regulation of apoptotic process; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; IDA:UniProtKB.
315Q03251    169   GRP8_ARATH Glycine-rich RNA-binding protein 8...720.000001     52     31     60GO:0005618; C:cell wall; IDA:TAIR.::GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005794; C:Golgi apparatus; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005777; C:peroxisome; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; IDA:TAIR.::GO:0009737; P:response to abscisic acid stimulus; IDA:TAIR.::GO:0009409; P:response to cold; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.::GO:0010043; P:response to zinc ion; IEP:TAIR.
316P37838    685   NOP4_YEAST Nucleolar protein 4 OS=Saccharomyc...533.2     34.3     32     55GO:0005730; C:nucleolus; TAS:SGD.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; TAS:SGD.
317Q1RMU5    815   RBM5_BOVIN RNA-binding protein 5 OS=Bos tauru...550.075     39.7     25     62GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB.
318Q6PH90    174   RB8AB_XENLA RNA-binding protein 8A-B OS=Xenop...840.006     41.2     30     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
319Q5R1W5    221   SRSF2_PANTR Serine/arginine-rich splicing fac...760.005     42     25     53GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
320Q9DF42    174   RB8AA_XENLA RNA-binding protein 8A-A OS=Xenop...840.006     41.2     30     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
321P10979    157   GRPA_MAIZE Glycine-rich RNA-binding, abscisic...720.00000009     55.5     39     57
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
322Q84L14    243   NCBP2_ORYSJ Nuclear cap-binding protein subun...740.21     37.4     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.
323Q4R535    474   CELF4_MACFA CUGBP Elav-like family member 4 O...1800.00000005     58.9     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
324Q5D018    174   RBM8A_DANRE RNA-binding protein 8A OS=Danio r...840.0005     44.3     31     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
325Q91YE7    815   RBM5_MOUSE RNA-binding protein 5 OS=Mus muscu...550.073     39.7     25     62GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB.
326Q5BGA9    819   MRD1_EMENI Multiple RNA-binding domain-contai...720.0002     48.1     32     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
327B2GV05    815   RBM5_RAT RNA-binding protein 5 OS=Rattus norv...550.074     39.7     25     62GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0043065; P:positive regulation of apoptotic process; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB.
328B1WC40    156   NCBP2_RAT Nuclear cap-binding protein subunit...740.022     39.3     31     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0046833; P:positive regulation of RNA export from nucleus; ISS:UniProtKB.::GO:0008380; P:RNA splicing; ISS:UniProtKB.::GO:0006408; P:snRNA export from nucleus; ISS:UniProtKB.
329Q9CQ49    156   NCBP2_MOUSE Nuclear cap-binding protein subun...740.022     39.3     31     50GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005845; C:mRNA cap binding complex; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0000340; F:RNA 7-methylguanosine cap binding; ISS:UniProtKB.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; ISS:UniProtKB.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; ISS:UniProtKB.::GO:0046833; P:positive regulation of RNA export from nucleus; ISS:UniProtKB.::GO:0006446; P:regulation of translational initiation; ISS:UniProtKB.::GO:0008380; P:RNA splicing; ISS:UniProtKB.::GO:0006408; P:snRNA export from nucleus; ISS:UniProtKB.
330Q03250    176   GRP7_ARATH Glycine-rich RNA-binding protein 7...730.00000008     55.8     37     59GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.::GO:0005777; C:peroxisome; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0003690; F:double-stranded DNA binding; IDA:TAIR.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0003697; F:single-stranded DNA binding; IDA:TAIR.
GO:0007623; P:circadian rhythm; IEP:TAIR.::GO:0032508; P:DNA duplex unwinding; IDA:TAIR.::GO:0045087; P:innate immune response; IDA:TAIR.::GO:0006406; P:mRNA export from nucleus; IMP:TAIR.::GO:0010119; P:regulation of stomatal movement; IMP:TAIR.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0009409; P:response to cold; IGI:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.::GO:0010043; P:response to zinc ion; IEP:TAIR.::GO:0010501; P:RNA secondary structure unwinding; IDA:TAIR.::GO:0010228; P:vegetative to reproductive phase transition of meristem; IMP:TAIR.
331Q8C854    591   MYEF2_MOUSE Myelin expression factor 2 OS=Mus...770.066     39.7     29     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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