Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Blastomyces dermatitidis LH 1408.1
Locus:
BDBG_00081
Length:
152
Number of sequences:
9555
Description:
polymerase II polypeptide D
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1O74825    135   RPB4_SCHPO DNA-directed RNA polymerase II sub...1288e-29     108     48     65GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; TAS:PomBase.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0000920; P:cytokinetic cell separation; IMP:PomBase.
2P20433    221   RPB4_YEAST DNA-directed RNA polymerase II sub...787e-16     75.5     53     72GO:0000932; C:cytoplasmic mRNA processing body; IDA:SGD.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0031369; F:translation initiation factor binding; IPI:SGD.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031990; P:mRNA export from nucleus in response to heat stress; IMP:SGD.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IMP:SGD.::GO:0045948; P:positive regulation of translational initiation; IMP:SGD.::GO:0034402; P:recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex; IMP:SGD.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IDA:SGD.
3Q9VEA5    139   RPB4_DROME DNA-directed RNA polymerase II 16 ...1160.0000000000002     67.8     36     56GO:0005671; C:Ada2/Gcn5/Ada3 transcription activator complex; IDA:FlyBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.::GO:0005700; C:polytene chromosome; IDA:FlyBase.
GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0003899; F:DNA-directed RNA polymerase activity; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:FlyBase.
GO:0008283; P:cell proliferation; IDA:FlyBase.::GO:0043966; P:histone H3 acetylation; IDA:FlyBase.::GO:0043967; P:histone H4 acetylation; IDA:FlyBase.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IDA:UniProtKB.
4Q9D7M8    142   RPB4_MOUSE DNA-directed RNA polymerase II sub...1170.000000000001     65.1     36     56GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003899; F:DNA-directed RNA polymerase activity; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
5O15514    142   RPB4_HUMAN DNA-directed RNA polymerase II sub...1170.000000000001     65.1     36     56GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.
GO:0003899; F:DNA-directed RNA polymerase activity; IMP:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
6Q54S04    155   RPB4_DICDI DNA-directed RNA polymerase II sub...820.000000000008     63.2     49     63GO:0005737; C:cytoplasm; IDA:dictyBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:dictyBase.
GO:0003899; F:DNA-directed RNA polymerase activity; IGI:dictyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006366; P:transcription from RNA polymerase II promoter; IGI:dictyBase.
7A6QPT7    954   ERAP2_BOVIN Endoplasmic reticulum aminopeptid...640.023     37.7     39     55GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004177; F:aminopeptidase activity; IEA:UniProtKB-KW.::GO:0008237; F:metallopeptidase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
8Q8CGM1    1561   BAI2_MOUSE Brain-specific angiogenesis inhibi...1140.62     33.5     27     41GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004930; F:G-protein coupled receptor activity; IEA:UniProtKB-KW.
GO:0016525; P:negative regulation of angiogenesis; IEA:InterPro.::GO:0007218; P:neuropeptide signaling pathway; IEA:InterPro.::GO:0007422; P:peripheral nervous system development; IDA:MGI.
9P34531    937   YM92_CAEEL Uncharacterized protein M01A8.2 OS...881.5     32.3     26     53
10Q12449    350   AHA1_YEAST Hsp90 co-chaperone AHA1 OS=Sacchar...783     31.6     29     46GO:0005737; C:cytoplasm; IPI:SGD.
GO:0001671; F:ATPase activator activity; IDA:UniProtKB.::GO:0051087; F:chaperone binding; IDA:SGD.
GO:0006457; P:protein folding; IMP:SGD.::GO:0006950; P:response to stress; IMP:SGD.
11Q3IEW3    276   DAPF_PSEHT Diaminopimelate epimerase OS=Pseud...594.8     30.8     31     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008837; F:diaminopimelate epimerase activity; IEA:EC.
GO:0009089; P:lysine biosynthetic process via diaminopimelate; IEA:InterPro.
records
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