Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
62161
Length:
290
Number of sequences:
10438
Description:
e_gw1.1.1029.1
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P0CS64    332   YTH1_CRYNJ mRNA 3'-end-processing protein YTH...3041e-73     235     46     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
2P0CS65    332   YTH1_CRYNB mRNA 3'-end-processing protein YTH...3041e-73     235     46     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
3Q4P384    366   YTH1_USTMA mRNA 3'-end-processing protein YTH...3352e-66     218     41     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
4O19137    243   CPSF4_BOVIN Cleavage and polyadenylation spec...2631e-46     162     38     50GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
5Q5FVR7    243   CPSF4_RAT Cleavage and polyadenylation specif...2632e-46     162     38     50GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
6O95639    269   CPSF4_HUMAN Cleavage and polyadenylation spec...2792e-45     160     36     48GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046778; P:modification by virus of host mRNA processing; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0019058; P:viral infectious cycle; TAS:Reactome.
7Q59T36    215   YTH1_CANAL mRNA 3'-end-processing protein YTH...1848e-45     157     46     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042493; P:response to drug; IMP:CGD.
8Q6CKU1    210   YTH1_KLULA mRNA 3'-end-processing protein YTH...1885e-44     154     45     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
9Q4WKD9    254   YTH1_ASPFU mRNA 3'-end-processing protein yth...2027e-44     155     43     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
10Q6DJP7    269   CPSF4_XENLA Cleavage and polyadenylation spec...2742e-43     155     38     50GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
11Q06102    208   YTH1_YEAST mRNA 3'-end-processing protein YTH...1893e-43     152     43     58GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0006378; P:mRNA polyadenylation; IDA:SGD.
12Q4IPA4    411   YTH1_GIBZE mRNA 3'-end-processing protein YTH...1925e-43     157     48     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
13Q66KE3    269   CPSF4_XENTR Cleavage and polyadenylation spec...2682e-42     152     37     49GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
14Q7SGR2    317   YTH1_NEUCR mRNA 3'-end-processing protein yth...1902e-41     151     46     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
15Q2URI6    255   YTH1_ASPOR mRNA 3'-end-processing protein yth...2027e-41     147     43     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
16Q758T3    209   YTH1_ASHGO mRNA 3'-end-processing protein YTH...1831e-40     146     43     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
17Q6BTT1    223   YTH1_DEBHA mRNA 3'-end-processing protein YTH...1881e-40     146     42     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
18Q5BGN2    254   YTH1_EMENI mRNA 3'-end-processing protein yth...1852e-40     146     45     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
19Q6C922    193   YTH1_YARLI mRNA 3'-end-processing protein YTH...940.1     37     32     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
20Q6FTL0    209   YTH1_CANGA mRNA 3'-end-processing protein YTH...1962e-38     140     40     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
21Q9UTD1    170   YTH1_SCHPO mRNA 3'-end-processing protein yth...1105e-37     135     61     74GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; IC:PomBase.
22A6NMK7    179   CPS4L_HUMAN Putative cleavage and polyadenyla...1512e-33     126     46     58
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
23Q8BQZ5    211   CPSF4_MOUSE Cleavage and polyadenylation spec...2617e-33     125     33     42GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
24A9LNK9    631   CPSF_ARATH Cleavage and polyadenylation speci...851e-18     89.7     51     60GO:0005634; C:nucleus; IDA:TAIR.
GO:0005516; F:calmodulin binding; IDA:TAIR.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IDA:TAIR.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
25Q0DA50    665   C3H45_ORYSJ Zinc finger CCCH domain-containin...782e-17     85.9     51     63
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
26Q8CHP0    950   ZC3H3_MOUSE Zinc finger CCCH domain-containin...1150.0004     45.4     30     50GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.::GO:0016973; P:poly(A)+ mRNA export from nucleus; ISS:UniProtKB.::GO:0010793; P:regulation of mRNA export from nucleus; ISS:UniProtKB.
27Q8IXZ2    948   ZC3H3_HUMAN Zinc finger CCCH domain-containin...1130.0002     46.2     29     49GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:UniProtKB.::GO:0010793; P:regulation of mRNA export from nucleus; IMP:UniProtKB.
28P61129    1189   ZC3H6_HUMAN Zinc finger CCCH domain-containin...590.027     39.7     31     51
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
29Q8BYK8    1177   ZC3H6_MOUSE Zinc finger CCCH domain-containin...1010.004     42.4     29     44
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
30Q8N5P1    291   ZC3H8_HUMAN Zinc finger CCCH domain-containin...604     32.3     28     52GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0033085; P:negative regulation of T cell differentiation in thymus; IMP:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0070245; P:positive regulation of thymocyte apoptotic process; IMP:UniProtKB.::GO:0046677; P:response to antibiotic; IDA:UniProtKB.::GO:0043029; P:T cell homeostasis; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
31Q3ED78    470   C3H7_ARATH Zinc finger CCCH domain-containing...560.035     39.3     36     50
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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