Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
215454
Length:
1800
Number of sequences:
10438
Description:
estExt_Genewise1.C_12310
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241Q2EEW9    834   RPOC1_HELSJ DNA-directed RNA polymerase subun...3492e-17     92.4     24     42GO:0009536; C:plastid; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
242P0CX07    397   RPOA2_HALSA DNA-directed RNA polymerase subun...917e-16     85.5     47     67
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
243B0R8D3    397   RPOA2_HALS3 DNA-directed RNA polymerase subun...917e-16     85.5     47     67
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
244P15353    393   RPOA2_HALMO DNA-directed RNA polymerase subun...750.000000000000001     84.7     52     73
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
245P21422    575   RPOC1_PLAF7 DNA-directed RNA polymerase subun...3270.000000000000005     84.3     24     45GO:0020011; C:apicoplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
246P14248    2452   RPB1_PLAFD DNA-directed RNA polymerase II sub...1680.000000000000008     84.7     39     49GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
247P25202    1741   RPC1_GIAIN DNA-directed RNA polymerase III su...1480.00000000000002     82.8     32     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
248P15398    1689   RPA1_SCHPO DNA-directed RNA polymerase I subu...1020.0000000000001     80.5     37     55GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006406; P:mRNA export from nucleus; IMP:PomBase.::GO:0007000; P:nucleolus organization; IMP:PomBase.::GO:0034503; P:protein localization to nucleolar rDNA repeats; IMP:PomBase.::GO:0006360; P:transcription from RNA polymerase I promoter; ISS:PomBase.
249P10964    1664   RPA1_YEAST DNA-directed RNA polymerase I subu...1250.0000000000006     78.2     36     54GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0042790; P:transcription of nuclear large rRNA transcript from RNA polymerase I promoter; IMP:SGD.
250P35074    1853   RPB1_CAEBR DNA-directed RNA polymerase II sub...730.000000000004     75.9     64     79GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
251P91875    1642   RPA1_DROME DNA-directed RNA polymerase I subu...1000.000000000006     75.1     39     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
252O95602    1720   RPA1_HUMAN DNA-directed RNA polymerase I subu...1040.00000000004     72.4     38     53GO:0005736; C:DNA-directed RNA polymerase I complex; NAS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.
253O35134    1717   RPA1_MOUSE DNA-directed RNA polymerase I subu...1100.00000000005     72     34     51GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:MGI.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
254O54889    1716   RPA1_RAT DNA-directed RNA polymerase I subuni...1100.0000000003     69.3     35     51GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:RGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009303; P:rRNA transcription; IDA:RGD.
255Q86H36    1615   RPA1_DICDI DNA-directed RNA polymerase I subu...1080.0000000005     68.9     36     52GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:dictyBase.
256P28363    638   RPA1_EUPOC DNA-directed RNA polymerase I subu...1000.000000002     66.2     34     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
257P96177    1046   RPOC_WEIHE DNA-directed RNA polymerase subuni...690.000000009     64.3     45     67
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
258P96178    1054   RPOC_WEIPA DNA-directed RNA polymerase subuni...690.00000001     64.3     45     67
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
259P95405    1004   RPOC_OENOE DNA-directed RNA polymerase subuni...490.0000001     60.5     55     80
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
260P0C0D9    989   RPOC_STRPY DNA-directed RNA polymerase subuni...480.0000003     59.7     56     77
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
261P77917    1055   RPOC_PEDAC DNA-directed RNA polymerase subuni...590.0000005     58.9     49     71
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
262P94899    989   RPOC_LEUPS DNA-directed RNA polymerase subuni...490.0000006     58.5     53     73
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
263P77839    1053   RPOC_BROTH DNA-directed RNA polymerase subuni...1920.000007     55.1     26     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
264B2UYA4    1177   RPOC_CLOBA DNA-directed RNA polymerase subuni...1690.000008     54.7     25     41
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
265Q9J593    1287   RP147_FOWPN DNA-directed RNA polymerase 147 k...1030.00001     54.3     31     51GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
266Q9LQ02    1453   NRPD1_ARATH DNA-directed RNA polymerase D sub...1330.00003     53.1     23     49GO:0000418; C:DNA-directed RNA polymerase IV complex; IDA:UniProtKB.
GO:0005507; F:copper ion binding; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0048038; F:quinone binding; IEA:InterPro.
GO:0009308; P:amine metabolic process; IEA:InterPro.::GO:0007267; P:cell-cell signaling; IMP:TAIR.::GO:0010495; P:long-distance posttranscriptional gene silencing; IMP:TAIR.::GO:0006346; P:methylation-dependent chromatin silencing; IMP:TAIR.::GO:0030422; P:production of siRNA involved in RNA interference; IMP:TAIR.
267A6LPQ5    1178   RPOC_CLOB8 DNA-directed RNA polymerase subuni...1660.00004     52.8     25     43
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
268A6TWI9    1171   RPOC_ALKMQ DNA-directed RNA polymerase subuni...1440.00004     52.4     28     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
269A9NEL8    1375   RPOC_ACHLI DNA-directed RNA polymerase subuni...690.00005     52     41     59
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
270O33431    1159   RPOC_PORCN DNA-directed RNA polymerase subuni...350.00007     51.6     60     80
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
271Q7NQE7    1396   RPOC_CHRVO DNA-directed RNA polymerase subuni...1040.00008     51.6     28     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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