Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
202225
Length:
1402
Number of sequences:
10438
Description:
estExt_Genewise1Plus.C_40146
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31P17546    1766   RPB1A_TRYBB DNA-directed RNA polymerase II su...14772e-179     587     30     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
32P27625    2339   RPC1_PLAFA DNA-directed RNA polymerase III su...1588e-32     140     48     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0032549; F:ribonucleoside binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
33Q7T6X5    1495   RPO1_MIMIV DNA-directed RNA polymerase subuni...1610.00000000003     72.4     27     50GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
34O35134    1717   RPA1_MOUSE DNA-directed RNA polymerase I subu...1740.00000001     63.9     28     47GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:MGI.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
35Q196X0    1377   RPB1_IIV3 Probable DNA-directed RNA polymeras...14833e-119     412     26     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
36Q86H36    1615   RPA1_DICDI DNA-directed RNA polymerase I subu...2040.00003     52.8     25     41GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:dictyBase.
37P15398    1689   RPA1_SCHPO DNA-directed RNA polymerase I subu...1030.000000009     64.3     30     53GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006406; P:mRNA export from nucleus; IMP:PomBase.::GO:0007000; P:nucleolus organization; IMP:PomBase.::GO:0034503; P:protein localization to nucleolar rDNA repeats; IMP:PomBase.::GO:0006360; P:transcription from RNA polymerase I promoter; ISS:PomBase.
38O54889    1716   RPA1_RAT DNA-directed RNA polymerase I subuni...1760.000000003     65.5     28     46GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:RGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009303; P:rRNA transcription; IDA:RGD.
39P10964    1664   RPA1_YEAST DNA-directed RNA polymerase I subu...1170.00002     53.5     30     48GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0042790; P:transcription of nuclear large rRNA transcript from RNA polymerase I promoter; IMP:SGD.
40A5DCV3    1579   RPB1_PICGU DNA-directed RNA polymerase II sub...6922e-87     317     35     49GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
41O95602    1720   RPA1_HUMAN DNA-directed RNA polymerase I subu...1740.000000003     65.9     28     47GO:0005736; C:DNA-directed RNA polymerase I complex; NAS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.
42P14248    2452   RPB1_PLAFD DNA-directed RNA polymerase II sub...1805e-18     94.7     29     57GO:0005665; C:DNA-directed RNA polymerase II, core complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; IEA:InterPro.
43P91875    1642   RPA1_DROME DNA-directed RNA polymerase I subu...1580.0000000001     70.1     30     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
44Q58445    1341   RPOA1_METJA DNA-directed RNA polymerase subun...4442e-82     300     39     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
45P0C988    1450   RPB1_ASFWA Probable DNA-directed RNA polymera...710.041     42.4     34     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
46P42486    1450   RPB1_ASFB7 Probable DNA-directed RNA polymera...710.043     42.4     34     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
47P0C989    1450   RPB1_ASFK5 Probable DNA-directed RNA polymera...710.043     42     34     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
48P0C987    1450   RPB1_ASFP4 Probable DNA-directed RNA polymera...710.042     42.4     34     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
49Q65215    1450   RPB1_ASFM2 Probable DNA-directed RNA polymera...710.043     42.4     34     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
50P16355    1744   RPA1_TRYBB DNA-directed RNA polymerase I subu...1030.02     43.1     24     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
51P28364    478   RPB1_EUPOC DNA-directed RNA polymerase II sub...4861e-81     282     35     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
52Q6GZW7    1293   RPB1_FRG3G Putative DNA-directed RNA polymera...3480.0000001     60.5     23     40
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
53B1YGU3    1199   RPOC_EXIS2 DNA-directed RNA polymerase subuni...610.041     42.4     43     62
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
54A7GK13    1204   RPOC_BACCN DNA-directed RNA polymerase subuni...1430.043     42     27     42
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
55A7GJ81    1178   RPOC_CLOBL DNA-directed RNA polymerase subuni...610.025     42.7     44     62
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
56Q82Z41    1217   RPOC_ENTFA DNA-directed RNA polymerase subuni...580.39     38.9     41     62
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
57B1KSN2    1178   RPOC_CLOBM DNA-directed RNA polymerase subuni...610.026     42.7     44     62
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
58B1IGG1    1178   RPOC_CLOBK DNA-directed RNA polymerase subuni...610.025     42.7     44     62
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
59A9VP70    1203   RPOC_BACWK DNA-directed RNA polymerase subuni...580.1     40.8     43     62
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
60A4IJI2    1199   RPOC_GEOTN DNA-directed RNA polymerase subuni...730.02     43.1     38     55
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
61P77819    1203   RPOC_BACAN DNA-directed RNA polymerase subuni...580.1     40.8     43     62
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
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