Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
200987
Length:
831
Number of sequences:
10438
Description:
estExt_Genewise1Plus.C_30343
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q1MTN7    957   RPM1_SCHPO Exoribonuclease II, mitochondrial ...6442e-40     164     26     44GO:0005759; C:mitochondrial matrix; ISS:PomBase.
GO:0008859; F:exoribonuclease II activity; ISS:PomBase.::GO:0003723; F:RNA binding; ISS:PomBase.
GO:0000965; P:mitochondrial RNA 3'-end processing; IMP:PomBase.
2P47950    1117   CYT4_NEUCR Mitochondrial protein cyt-4 OS=125...4681e-26     120     30     44GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
3P73177    666   RN2H_SYNY3 Uncharacterized ribonuclease sll12...4184e-23     108     25     41
GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
4P39112    969   DSS1_YEAST Exoribonuclease II, mitochondrial ...4393e-20     100     24     43GO:0045025; C:mitochondrial degradosome; IDA:SGD.::GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IDA:SGD.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000957; P:mitochondrial RNA catabolic process; IMP:SGD.
5O32231    779   RNR_BACSU Ribonuclease R OS=Bacillus subtilis...3870.000000000001     75.5     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
6Q9WZI1    710   RNR_THEMA Ribonuclease R OS=Thermotoga mariti...3730.0000000003     67.4     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
7Q8CI75    870   DI3L2_MOUSE DIS3-like exonuclease 2 OS=Mus mu...3710.0000000008     66.2     24     42GO:0005737; C:cytoplasm; ISS:UniProtKB.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0051306; P:mitotic sister chromatid separation; ISS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB.
8O67834    705   RNR_AQUAE Ribonuclease R OS=Aquifex aeolicus ...3860.000000003     64.7     24     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
9Q9PK00    692   RNR_CHLMU Ribonuclease R OS=Chlamydia muridar...3640.000000003     64.3     24     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
10O84402    694   RNR_CHLTR Ribonuclease R OS=Chlamydia trachom...3820.00000005     60.5     24     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
11Q9CH00    817   RNR1_LACLA Ribonuclease R 1 OS=lactis). GN=rn...530.025     42     45     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
12Q08162    1001   RRP44_YEAST Exosome complex exonuclease DIS3 ...3880.0000002     58.9     22     39GO:0000177; C:cytoplasmic exosome (RNase complex); IDA:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0000176; C:nuclear exosome (RNase complex); IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.
GO:0000175; F:3'-5'-exoribonuclease activity; IDA:SGD.::GO:0004521; F:endoribonuclease activity; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0000049; F:tRNA binding; IDA:SGD.
GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0070651; P:nonfunctional rRNA decay; IMP:SGD.::GO:0071028; P:nuclear mRNA surveillance; IMP:SGD.::GO:0071039; P:nuclear polyadenylation-dependent CUT catabolic process; IMP:SGD.::GO:0071042; P:nuclear polyadenylation-dependent mRNA catabolic process; IC:SGD.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IMP:SGD.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; IDA:SGD.::GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; IC:SGD.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; IC:SGD.::GO:0071051; P:polyadenylation-dependent snoRNA 3'-end processing; IC:SGD.
13Q8IYB7    885   DI3L2_HUMAN DIS3-like exonuclease 2 OS=Homo s...3990.0000002     58.5     24     39GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; IDA:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0051306; P:mitotic sister chromatid separation; IMP:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB.
14P21499    813   RNR_ECOLI Ribonuclease R OS=Escherichia coli ...3850.0000002     58.2     24     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IDA:EcoCyc.::GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016556; P:mRNA modification; IDA:EcoCyc.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0000154; P:rRNA modification; IDA:EcoCyc.
15Q9Z848    676   RNR_CHLPN Ribonuclease R OS=Chlamydia pneumon...3820.0000003     57.8     21     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
16P54084    439   RNR_THIFE Ribonuclease R OS=Thiobacillus ferr...1960.0000004     57     26     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
17P30851    813   RNR_SHIFL Ribonuclease R OS=Shigella flexneri...3850.0000006     57     24     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.::GO:0016070; P:RNA metabolic process; IEA:InterPro.
18D3V184    646   RNB_XENBS Exoribonuclease 2 OS=Xenorhabdus bo...3890.0000008     56.2     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
19O14040    927   DIS3L_SCHPO Dis3-like exonuclease C2C4.07c OS...3830.000001     56.2     23     38GO:0005829; C:cytosol; IDA:PomBase.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0033554; P:cellular response to stress; IEP:PomBase.
20B0BP37    658   RNB_ACTPJ Exoribonuclease 2 OS=Actinobacillus...4290.000001     55.8     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
21A3N0B9    658   RNB_ACTP2 Exoribonuclease 2 OS=Actinobacillus...4320.000001     55.5     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
22B3GXJ4    658   RNB_ACTP7 Exoribonuclease 2 OS=Actinobacillus...4290.000002     55.1     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
23Q02146    665   RNR2_LACLA Ribonuclease R 2 OS=lactis). GN=rn...3810.000003     54.7     24     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
24B4EW02    647   RNB_PROMH Exoribonuclease 2 OS=Proteus mirabi...3920.000003     54.3     20     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
25A4WAX5    644   RNB_ENT38 Exoribonuclease 2 OS=Enterobacter s...3900.000004     54.3     22     35GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
26Q8K917    726   RNR_BUCAP Ribonuclease R OS=Buchnera aphidico...3720.00001     53.1     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
27P44907    782   RNR_HAEIN Ribonuclease R OS=Haemophilus influ...4070.00001     52.8     23     35GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
28P40611    835   RNR_VIBPA Ribonuclease R OS=Vibrio parahaemol...3800.00001     52.8     23     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
29Q9PR88    721   RNR_UREPA Ribonuclease R OS=Ureaplasma parvum...380.27     38.5     45     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016070; P:RNA metabolic process; IEA:InterPro.
30Q0V9R3    834   DI3L2_XENTR DIS3-like exonuclease 2 OS=Xenopu...1360.00002     52     29     46
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
31Q7N4F5    647   RNB_PHOLL Exoribonuclease 2 OS=Photorhabdus l...3710.00007     50.1     22     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006401; P:RNA catabolic process; IEA:InterPro.
records
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