rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q1MTN7 | 957 | RPM1_SCHPO Exoribonuclease II, mitochondrial ... | 644 | 2e-40 | 164 | 26 | 44 | GO:0005759; C:mitochondrial matrix; ISS:PomBase. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; ISS:PomBase.::GO:0003723; F:RNA binding; ISS:PomBase. | | | | | | | | | | GO:0000965; P:mitochondrial RNA 3'-end processing; IMP:PomBase. | 2 | P47950 | 1117 | CYT4_NEUCR Mitochondrial protein cyt-4 OS=125... | 468 | 1e-26 | 120 | 30 | 44 | GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 3 | P73177 | 666 | RN2H_SYNY3 Uncharacterized ribonuclease sll12... | 418 | 4e-23 | 108 | 25 | 41 | | | | | | | | | | | GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | | 4 | P39112 | 969 | DSS1_YEAST Exoribonuclease II, mitochondrial ... | 439 | 3e-20 | 100 | 24 | 43 | GO:0045025; C:mitochondrial degradosome; IDA:SGD.::GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IDA:SGD.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000957; P:mitochondrial RNA catabolic process; IMP:SGD. | 5 | O32231 | 779 | RNR_BACSU Ribonuclease R OS=Bacillus subtilis... | 387 | 0.000000000001 | 75.5 | 24 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 6 | Q9WZI1 | 710 | RNR_THEMA Ribonuclease R OS=Thermotoga mariti... | 373 | 0.0000000003 | 67.4 | 25 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 7 | Q8CI75 | 870 | DI3L2_MOUSE DIS3-like exonuclease 2 OS=Mus mu... | 371 | 0.0000000008 | 66.2 | 24 | 42 | GO:0005737; C:cytoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051306; P:mitotic sister chromatid separation; ISS:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB. | 8 | O67834 | 705 | RNR_AQUAE Ribonuclease R OS=Aquifex aeolicus ... | 386 | 0.000000003 | 64.7 | 24 | 38 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 9 | Q9PK00 | 692 | RNR_CHLMU Ribonuclease R OS=Chlamydia muridar... | 364 | 0.000000003 | 64.3 | 24 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 10 | O84402 | 694 | RNR_CHLTR Ribonuclease R OS=Chlamydia trachom... | 382 | 0.00000005 | 60.5 | 24 | 38 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 11 | Q9CH00 | 817 | RNR1_LACLA Ribonuclease R 1 OS=lactis). GN=rn... | 53 | 0.025 | 42 | 45 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 12 | Q08162 | 1001 | RRP44_YEAST Exosome complex exonuclease DIS3 ... | 388 | 0.0000002 | 58.9 | 22 | 39 | GO:0000177; C:cytoplasmic exosome (RNase complex); IDA:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0000176; C:nuclear exosome (RNase complex); IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IDA:SGD.::GO:0004521; F:endoribonuclease activity; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0000049; F:tRNA binding; IDA:SGD. | | | | | | | | | | GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0070651; P:nonfunctional rRNA decay; IMP:SGD.::GO:0071028; P:nuclear mRNA surveillance; IMP:SGD.::GO:0071039; P:nuclear polyadenylation-dependent CUT catabolic process; IMP:SGD.::GO:0071042; P:nuclear polyadenylation-dependent mRNA catabolic process; IC:SGD.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IMP:SGD.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; IDA:SGD.::GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; IC:SGD.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; IC:SGD.::GO:0071051; P:polyadenylation-dependent snoRNA 3'-end processing; IC:SGD. | 13 | Q8IYB7 | 885 | DI3L2_HUMAN DIS3-like exonuclease 2 OS=Homo s... | 399 | 0.0000002 | 58.5 | 24 | 39 | GO:0005737; C:cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; IDA:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051306; P:mitotic sister chromatid separation; IMP:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IMP:UniProtKB. | 14 | P21499 | 813 | RNR_ECOLI Ribonuclease R OS=Escherichia coli ... | 385 | 0.0000002 | 58.2 | 24 | 38 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IDA:EcoCyc.::GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016556; P:mRNA modification; IDA:EcoCyc.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0000154; P:rRNA modification; IDA:EcoCyc. | 15 | Q9Z848 | 676 | RNR_CHLPN Ribonuclease R OS=Chlamydia pneumon... | 382 | 0.0000003 | 57.8 | 21 | 37 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 16 | P54084 | 439 | RNR_THIFE Ribonuclease R OS=Thiobacillus ferr... | 196 | 0.0000004 | 57 | 26 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 17 | P30851 | 813 | RNR_SHIFL Ribonuclease R OS=Shigella flexneri... | 385 | 0.0000006 | 57 | 24 | 38 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.::GO:0016070; P:RNA metabolic process; IEA:InterPro. | 18 | D3V184 | 646 | RNB_XENBS Exoribonuclease 2 OS=Xenorhabdus bo... | 389 | 0.0000008 | 56.2 | 23 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006401; P:RNA catabolic process; IEA:InterPro. | 19 | O14040 | 927 | DIS3L_SCHPO Dis3-like exonuclease C2C4.07c OS... | 383 | 0.000001 | 56.2 | 23 | 38 | GO:0005829; C:cytosol; IDA:PomBase. | | | | | | | | | | GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0033554; P:cellular response to stress; IEP:PomBase. | 20 | B0BP37 | 658 | RNB_ACTPJ Exoribonuclease 2 OS=Actinobacillus... | 429 | 0.000001 | 55.8 | 23 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006401; P:RNA catabolic process; IEA:InterPro. | 21 | A3N0B9 | 658 | RNB_ACTP2 Exoribonuclease 2 OS=Actinobacillus... | 432 | 0.000001 | 55.5 | 23 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006401; P:RNA catabolic process; IEA:InterPro. | 22 | B3GXJ4 | 658 | RNB_ACTP7 Exoribonuclease 2 OS=Actinobacillus... | 429 | 0.000002 | 55.1 | 23 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006401; P:RNA catabolic process; IEA:InterPro. | 23 | Q02146 | 665 | RNR2_LACLA Ribonuclease R 2 OS=lactis). GN=rn... | 381 | 0.000003 | 54.7 | 24 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 24 | B4EW02 | 647 | RNB_PROMH Exoribonuclease 2 OS=Proteus mirabi... | 392 | 0.000003 | 54.3 | 20 | 38 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006401; P:RNA catabolic process; IEA:InterPro. | 25 | A4WAX5 | 644 | RNB_ENT38 Exoribonuclease 2 OS=Enterobacter s... | 390 | 0.000004 | 54.3 | 22 | 35 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006401; P:RNA catabolic process; IEA:InterPro. | 26 | Q8K917 | 726 | RNR_BUCAP Ribonuclease R OS=Buchnera aphidico... | 372 | 0.00001 | 53.1 | 23 | 40 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 27 | P44907 | 782 | RNR_HAEIN Ribonuclease R OS=Haemophilus influ... | 407 | 0.00001 | 52.8 | 23 | 35 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 28 | P40611 | 835 | RNR_VIBPA Ribonuclease R OS=Vibrio parahaemol... | 380 | 0.00001 | 52.8 | 23 | 38 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 29 | Q9PR88 | 721 | RNR_UREPA Ribonuclease R OS=Ureaplasma parvum... | 38 | 0.27 | 38.5 | 45 | 61 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016070; P:RNA metabolic process; IEA:InterPro. | 30 | Q0V9R3 | 834 | DI3L2_XENTR DIS3-like exonuclease 2 OS=Xenopu... | 136 | 0.00002 | 52 | 29 | 46 | | | | | | | | | | | GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0004540; F:ribonuclease activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 31 | Q7N4F5 | 647 | RNB_PHOLL Exoribonuclease 2 OS=Photorhabdus l... | 371 | 0.00007 | 50.1 | 22 | 37 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006401; P:RNA catabolic process; IEA:InterPro. |