Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
199759
Length:
972
Number of sequences:
10438
Description:
estExt_Genewise1Plus.C_21124
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q5K654    677   CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=P...960.34     38.5     28     50GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
32Q6C186    676   CLF1_YARLI Pre-mRNA-splicing factor CLF1 OS=l...2900.96     37     19     40GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
33Q9FNS4    662   MBB1_CHLRE PsbB mRNA maturation factor Mbb1, ...3000.00004     51.2     20     41GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
34Q5BDX1    673   CLF1_EMENI Pre-mRNA-splicing factor clf1 OS=1...930.25     38.9     29     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
35Q4PB37    781   CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=U...866.8     34.3     29     47GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
36Q2KJJ0    941   PRP6_BOVIN Pre-mRNA-processing factor 6 OS=Bo...4320.18     39.3     23     40GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
37A1A5S1    941   PRP6_RAT Pre-mRNA-processing factor 6 OS=Ratt...4430.026     42.4     22     37GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
38Q91YR7    941   PRP6_MOUSE Pre-mRNA-processing factor 6 OS=Mu...4430.02     42.7     22     37GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
39Q6NS46    1862   RRP5_MOUSE Protein RRP5 homolog OS=Mus muscul...2230.0006     47.8     23     47GO:0005829; C:cytosol; IDA:MGI.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006915; P:apoptotic process; TAS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; TAS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; TAS:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
40O94906    941   PRP6_HUMAN Pre-mRNA-processing factor 6 OS=Ho...4430.048     41.2     22     37GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0071001; C:U4/U6 snRNP; IDA:BHF-UCL.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:BHF-UCL.::GO:0005682; C:U5 snRNP; IDA:BHF-UCL.
GO:0050681; F:androgen receptor binding; IPI:MGI.::GO:0043021; F:ribonucleoprotein complex binding; IDA:BHF-UCL.::GO:0003713; F:transcription coactivator activity; IGI:MGI.
GO:0000244; P:assembly of spliceosomal tri-snRNP; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0000245; P:spliceosomal complex assembly; NAS:UniProtKB.
41A7MB10    1874   RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus...1202.2     35.8     21     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
42Q12309    687   CLF1_YEAST Pre-mRNA-splicing factor CLF1 OS=S...1772.9     35.4     23     41GO:0000785; C:chromatin; IDA:SGD.::GO:0000974; C:Prp19 complex; IDA:SGD.::GO:0071006; C:U2-type catalytic step 1 spliceosome; IDA:SGD.::GO:0071007; C:U2-type catalytic step 2 spliceosome; IDA:SGD.::GO:0071008; C:U2-type post-mRNA release spliceosomal complex; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003688; F:DNA replication origin binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000354; P:cis assembly of pre-catalytic spliceosome; IMP:SGD.::GO:0006270; P:DNA-dependent DNA replication initiation; IMP:SGD.
43Q14690    1871   RRP5_HUMAN Protein RRP5 homolog OS=Homo sapie...2220.002     46.2     23     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.
GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
44P87312    674   CLF1_SCHPO Pre-mRNA-splicing factor cwf4 OS=S...2700.36     38.5     21     40GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase.
45Q5RCC2    941   PRP6_PONAB Pre-mRNA-processing factor 6 OS=Po...4430.75     37.4     21     36GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
46Q5AED6    758   CLF1_CANAL Pre-mRNA-splicing factor CLF1 OS=C...2090.085     40.4     24     43GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
47Q8K2Z2    665   PRP39_MOUSE Pre-mRNA-processing factor 39 OS=...1300.022     42.4     26     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
48Q6FW76    695   CLF1_CANGA Pre-mRNA-splicing factor CLF1 OS=N...1609.9     33.5     23     44GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
49Q6CJK2    684   CLF1_KLULA Pre-mRNA-splicing factor CLF1 OS=1...1145.2     34.7     25     46GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
50Q7KRW8    1066   PRP39_DROME Pre-mRNA-processing factor 39 OS=...1330.15     39.7     24     43GO:0005685; C:U1 snRNP; ISS:FlyBase.
GO:0031072; F:heat shock protein binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.
51Q86UA1    669   PRP39_HUMAN Pre-mRNA-processing factor 39 OS=...1020.17     39.3     25     42GO:0005634; C:nucleus; IDA:HPA.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
52Q67JT4    1179   RPOC_SYMTH DNA-directed RNA polymerase subuni...1630.26     38.9     27     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
53Q12381    906   PRP1_SCHPO Pre-mRNA-splicing factor prp1 OS=S...3730.37     38.5     24     40GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0005488; F:binding; IEA:InterPro.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IMP:PomBase.
54Q750X3    683   CLF1_ASHGO Pre-mRNA-splicing factor CLF1 OS=Y...870.97     37     29     46GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
55Q9KIV2    1013   HGBA_HAEIF Hemoglobin-binding protein A OS=Ha...1320.74     37.4     28     50GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0005215; F:transporter activity; IEA:InterPro.
56O14233    733   RNA14_SCHPO mRNA 3'-end-processing protein rn...821.1     36.6     34     49GO:0005739; C:mitochondrion; ISS:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:PomBase.
GO:0005488; F:binding; IEA:InterPro.
GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.
57Q15020    963   SART3_HUMAN Squamous cell carcinoma antigen r...671.4     36.6     34     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
58Q5REG1    981   SART3_PONAB Squamous cell carcinoma antigen r...671.6     36.2     34     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
59Q9KIV0    993   HGBC_HAEIF Hemoglobin-binding protein C OS=Ha...1321.8     36.2     27     50GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0005215; F:transporter activity; IEA:InterPro.
60Q45746    1166   CR1GA_BACTU Pesticidal crystal protein cry1Ga...1792.5     35.8     24     42
GO:0005102; F:receptor binding; IEA:InterPro.
GO:0006952; P:defense response; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:InterPro.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
61O74835    1690   RRP5_SCHPO rRNA biogenesis protein rrp5 OS=Sc...1882.7     35.8     24     44GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0042134; F:rRNA primary transcript binding; ISS:PomBase.::GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; ISS:PomBase.
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