| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
61 | P63154 | 690 | CRNL1_MOUSE Crooked neck-like protein 1 OS=Mu... | 132 | 1.1 | 37.4 | 23 | 43 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 62 | P74142 | 305 | RS1B_SYNY3 30S ribosomal protein S1 homolog B... | 271 | 0.01 | 43.5 | 21 | 43 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 63 | Q7SGD2 | 695 | CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=... | 96 | 0.17 | 40 | 25 | 50 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 64 | Q4WT84 | 676 | CLF1_ASPFU Pre-mRNA-splicing factor clf1 OS=A... | 250 | 0.74 | 38.1 | 23 | 38 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 65 | Q4PB37 | 781 | CLF1_USTMA Pre-mRNA-splicing factor CLF1 OS=U... | 102 | 0.001 | 47.4 | 26 | 52 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 66 | Q895G2 | 635 | ISPH_CLOTE 4-hydroxy-3-methylbut-2-enyl dipho... | 161 | 1.7 | 37 | 25 | 49 | GO:0005840; C:ribosome; IEA:InterPro. | | | | | | | | | | GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051745; F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0019288; P:isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro. | 67 | Q54XP4 | 705 | CRNL1_DICDI Crooked neck-like protein 1 OS=Di... | 189 | 2.8 | 36.2 | 24 | 41 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 68 | A2BXQ9 | 721 | PNP_PROM5 Polyribonucleotide nucleotidyltrans... | 113 | 0.003 | 45.4 | 35 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 69 | A2BSA7 | 721 | PNP_PROMS Polyribonucleotide nucleotidyltrans... | 113 | 0.004 | 45.4 | 35 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 70 | A8G5Y9 | 721 | PNP_PROM2 Polyribonucleotide nucleotidyltrans... | 113 | 0.004 | 45.4 | 35 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 71 | Q7V0R5 | 721 | PNP_PROMP Polyribonucleotide nucleotidyltrans... | 113 | 0.004 | 45.4 | 35 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 72 | A3PE40 | 721 | PNP_PROM0 Polyribonucleotide nucleotidyltrans... | 113 | 0.005 | 45.1 | 35 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 73 | Q319U4 | 721 | PNP_PROM9 Polyribonucleotide nucleotidyltrans... | 113 | 0.005 | 45.1 | 35 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 74 | P80870 | 130 | GS13_BACSU General stress protein 13 OS=Bacil... | 86 | 0.023 | 40.4 | 26 | 49 | GO:0005840; C:ribosome; IEA:InterPro. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0006412; P:translation; IEA:InterPro. | 75 | Q9PGQ9 | 700 | PNP_XYLFA Polyribonucleotide nucleotidyltrans... | 117 | 0.008 | 44.3 | 28 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 76 | A7HK24 | 693 | PNP_FERNB Polyribonucleotide nucleotidyltrans... | 74 | 0.009 | 44.3 | 36 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 77 | P37560 | 128 | YABR_BACSU Uncharacterized protein yabR OS=Ba... | 73 | 9.3 | 32.7 | 30 | 49 | | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | | 78 | B9K8Y9 | 707 | PNP_THENN Polyribonucleotide nucleotidyltrans... | 63 | 0.011 | 43.9 | 41 | 62 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 79 | B4SQR6 | 702 | PNP_STRM5 Polyribonucleotide nucleotidyltrans... | 92 | 0.012 | 43.9 | 37 | 55 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 80 | Q87EV0 | 700 | PNP_XYLFT Polyribonucleotide nucleotidyltrans... | 117 | 0.014 | 43.5 | 28 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 81 | B2I730 | 700 | PNP_XYLF2 Polyribonucleotide nucleotidyltrans... | 117 | 0.014 | 43.5 | 28 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 82 | C0ZF43 | 715 | PNP_BREBN Polyribonucleotide nucleotidyltrans... | 78 | 0.014 | 43.5 | 38 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 83 | B0U1R2 | 700 | PNP_XYLFM Polyribonucleotide nucleotidyltrans... | 117 | 0.015 | 43.5 | 28 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 84 | P73530 | 328 | RS1A_SYNY3 30S ribosomal protein S1 homolog A... | 237 | 0.71 | 37.7 | 20 | 41 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 85 | A5IMM8 | 708 | PNP_THEP1 Polyribonucleotide nucleotidyltrans... | 67 | 0.016 | 43.5 | 37 | 61 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 86 | B1LBY0 | 708 | PNP_THESQ Polyribonucleotide nucleotidyltrans... | 67 | 0.016 | 43.5 | 37 | 61 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 87 | Q9X166 | 708 | PNP_THEMA Polyribonucleotide nucleotidyltrans... | 67 | 0.016 | 43.5 | 37 | 61 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 88 | O31489 | 719 | YDCI_BACSU Uncharacterized protein ydcI OS=Ba... | 75 | 1.5 | 37 | 29 | 51 | | | | | | | | | | | GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. | 89 | Q54Z08 | 850 | SYF1_DICDI Pre-mRNA-splicing factor SYF1 OS=D... | 147 | 0.019 | 43.1 | 25 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 90 | B2FN86 | 702 | PNP_STRMK Polyribonucleotide nucleotidyltrans... | 92 | 0.019 | 43.1 | 37 | 55 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 91 | B2S4C3 | 702 | PNP_TREPS Polyribonucleotide nucleotidyltrans... | 64 | 0.021 | 43.1 | 39 | 61 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. |
