| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | Q97I09 | 642 | ISPH_CLOAB 4-hydroxy-3-methylbut-2-enyl dipho... | 274 | 0.000002 | 55.8 | 24 | 47 | GO:0005840; C:ribosome; IEA:InterPro. | | | | | | | | | | GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051745; F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0019288; P:isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro. | 32 | Q89AJ3 | 566 | RS1_BUCBP 30S ribosomal protein S1 OS=Buchner... | 357 | 0.00002 | 52.4 | 24 | 45 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 33 | Q92HM4 | 568 | RS1_RICCN 30S ribosomal protein S1 OS=Rickett... | 355 | 0.004 | 45.4 | 22 | 42 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 34 | Q1XDE2 | 263 | RR1_PORYE 30S ribosomal protein S1, chloropla... | 77 | 1.5 | 36.2 | 27 | 58 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 35 | O06147 | 481 | RS1_MYCTU 30S ribosomal protein S1 OS=Mycobac... | 147 | 0.002 | 46.2 | 27 | 45 | GO:0005618; C:cell wall; IDA:MTBBASE.::GO:0005829; C:cytosol; IDA:MTBBASE.::GO:0005886; C:plasma membrane; IDA:MTBBASE.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0040007; P:growth; IMP:MTBBASE.::GO:0006412; P:translation; IEA:InterPro. | 36 | P51345 | 263 | RR1_PORPU 30S ribosomal protein S1, chloropla... | 102 | 0.16 | 39.3 | 25 | 55 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 37 | Q45388 | 791 | TEX_BORPE Protein tex OS=Bordetella pertussis... | 81 | 0.58 | 38.5 | 31 | 53 | | | | | | | | | | | GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. | 38 | Q6GGT5 | 391 | RS1_STAAR 30S ribosomal protein S1 OS=Staphyl... | 321 | 1.1 | 37 | 23 | 44 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 39 | Q7A5J0 | 391 | RS1_STAAN 30S ribosomal protein S1 OS=Staphyl... | 362 | 0.079 | 40.8 | 20 | 43 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 40 | Q99U14 | 391 | RS1_STAAM 30S ribosomal protein S1 OS=Staphyl... | 362 | 0.079 | 40.8 | 20 | 43 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 41 | Q68WL4 | 568 | RS1_RICTY 30S ribosomal protein S1 OS=Rickett... | 362 | 0.2 | 39.7 | 22 | 41 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 42 | Q8NWM8 | 391 | RS1_STAAW 30S ribosomal protein S1 OS=Staphyl... | 321 | 0.26 | 39.3 | 23 | 44 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 43 | Q6G987 | 391 | RS1_STAAS 30S ribosomal protein S1 OS=Staphyl... | 321 | 0.26 | 39.3 | 23 | 44 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 44 | Q5HFU7 | 391 | RS1_STAAC 30S ribosomal protein S1 OS=Staphyl... | 321 | 0.26 | 39.3 | 23 | 44 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 45 | Q51152 | 757 | YHGF_NEIMB Uncharacterized protein NMB0075 OS... | 79 | 0.014 | 43.5 | 34 | 56 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 46 | P57072 | 757 | YHGF_NEIMA Uncharacterized protein NMA0194 OS... | 79 | 0.014 | 43.5 | 34 | 56 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 47 | P0CO10 | 726 | CLF1_CRYNJ Pre-mRNA-splicing factor CLF1 OS=A... | 167 | 0.45 | 38.9 | 26 | 46 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 48 | P0CO11 | 726 | CLF1_CRYNB Pre-mRNA-splicing factor CLF1 OS=(... | 167 | 0.45 | 38.9 | 26 | 46 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 49 | Q9HF03 | 724 | CLF1_CRYNV Pre-mRNA-splicing factor CLF1 OS=g... | 167 | 0.42 | 38.9 | 26 | 46 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 50 | Q9ZD28 | 568 | RS1_RICPR 30S ribosomal protein S1 OS=Rickett... | 271 | 0.9 | 37.7 | 26 | 44 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 51 | P71353 | 762 | Y568_HAEIN Uncharacterized protein HI_0568 OS... | 97 | 0.018 | 43.5 | 34 | 51 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 52 | Q4L6I1 | 392 | RS1_STAHJ 30S ribosomal protein S1 OS=Staphyl... | 215 | 0.00004 | 51.2 | 25 | 48 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 53 | P38494 | 382 | RS1H_BACSU 30S ribosomal protein S1 homolog O... | 167 | 0.011 | 43.5 | 28 | 50 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 54 | Q9BZJ0 | 848 | CRNL1_HUMAN Crooked neck-like protein 1 OS=Ho... | 132 | 0.98 | 37.7 | 22 | 43 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; IDA:UniProtKB. | 55 | P14129 | 568 | RS1_RHIME 30S ribosomal protein S1 OS=melilot... | 491 | 0.047 | 42 | 23 | 40 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 56 | Q5HP69 | 392 | RS1_STAEQ 30S ribosomal protein S1 OS=Staphyl... | 363 | 0.008 | 43.9 | 18 | 43 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 57 | Q5K654 | 677 | CLF1_PARBR Pre-mRNA-splicing factor CLF1 OS=P... | 96 | 0.71 | 38.1 | 25 | 48 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 58 | Q527H0 | 691 | CLF1_MAGO7 Pre-mRNA-splicing factor CLF1 OS=b... | 219 | 1.8 | 36.6 | 21 | 37 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005488; F:binding; IEA:InterPro. | | | | | | | | | | GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 59 | P46837 | 773 | YHGF_ECOLI Protein yhgF OS=Escherichia coli (... | 76 | 0.18 | 40 | 28 | 54 | | | | | | | | | | | GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro. | 60 | P63155 | 690 | CRNL1_RAT Crooked neck-like protein 1 OS=Ratt... | 132 | 1.1 | 37.4 | 23 | 43 | | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. | 61 | P63154 | 690 | CRNL1_MOUSE Crooked neck-like protein 1 OS=Mu... | 132 | 1.1 | 37.4 | 23 | 43 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000245; P:spliceosomal complex assembly; ISS:UniProtKB. |
