| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | O74835 | 1690 | RRP5_SCHPO rRNA biogenesis protein rrp5 OS=Sc... | 416 | 0.0002 | 50.1 | 21 | 41 | GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase. | | | | | | | | | | GO:0042134; F:rRNA primary transcript binding; ISS:PomBase.::GO:0030515; F:snoRNA binding; ISS:PomBase. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; ISS:PomBase. | 2 | Q05022 | 1729 | RRP5_YEAST rRNA biogenesis protein RRP5 OS=Sa... | 1094 | 3e-67 | 254 | 26 | 47 | GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD. | | | | | | | | | | GO:0008266; F:poly(U) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000464; P:endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD. | 3 | Q14690 | 1871 | RRP5_HUMAN Protein RRP5 homolog OS=Homo sapie... | 61 | 0.54 | 38.5 | 31 | 56 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008134; F:transcription factor binding; IPI:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 4 | A7MB10 | 1874 | RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus... | 314 | 3.6 | 35.8 | 24 | 42 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 5 | Q6NS46 | 1862 | RRP5_MOUSE Protein RRP5 homolog OS=Mus muscul... | 116 | 1.1 | 37.7 | 24 | 44 | GO:0005829; C:cytosol; IDA:MGI.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; TAS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:InterPro.::GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB cascade; TAS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; TAS:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 6 | P38016 | 570 | RS1_CHLMU 30S ribosomal protein S1 OS=Chlamyd... | 372 | 0.000000006 | 63.9 | 22 | 46 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 7 | Q9Z8M3 | 580 | RS1_CHLPN 30S ribosomal protein S1 OS=Chlamyd... | 274 | 10 | 34.3 | 21 | 48 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 8 | O84100 | 569 | RS1_CHLTR 30S ribosomal protein S1 OS=Chlamyd... | 376 | 0.00000001 | 63.2 | 21 | 46 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 9 | Q6NDP1 | 565 | RS1_RHOPA 30S ribosomal protein S1 OS=Rhodops... | 91 | 0.29 | 39.3 | 30 | 54 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 10 | Q9JZ44 | 561 | RS1_NEIMB 30S ribosomal protein S1 OS=Neisser... | 173 | 0.0001 | 50.1 | 25 | 49 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 11 | Q83E09 | 551 | RS1_COXBU 30S ribosomal protein S1 OS=Coxiell... | 183 | 0.89 | 37.7 | 21 | 48 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 12 | P50889 | 429 | RS1_LEULA 40S ribosomal protein S1 OS=Leucono... | 426 | 0.008 | 44.3 | 20 | 41 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 13 | Q8RI52 | 827 | ISPH_FUSNN 4-hydroxy-3-methylbut-2-enyl dipho... | 142 | 0.068 | 41.6 | 27 | 51 | GO:0005840; C:ribosome; IEA:InterPro. | | | | | | | | | | GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051745; F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0019288; P:isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro. | 14 | P14128 | 378 | RS1_PROSP 30S ribosomal protein S1 OS=Provide... | 71 | 0.002 | 45.4 | 38 | 54 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 15 | Q44653 | 559 | RS1_BUCAP 30S ribosomal protein S1 OS=Buchner... | 350 | 0.41 | 38.9 | 21 | 41 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 16 | Q48082 | 549 | RS1_HAEIN 30S ribosomal protein S1 OS=Haemoph... | 280 | 0.0000002 | 58.9 | 25 | 44 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 17 | Q9HZ71 | 559 | RS1_PSEAE 30S ribosomal protein S1 OS=12228).... | 358 | 0.035 | 42.4 | 22 | 44 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 18 | P0AG70 | 557 | RS1_SHIFL 30S ribosomal protein S1 OS=Shigell... | 377 | 0.002 | 46.6 | 25 | 43 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 19 | P0AG67 | 557 | RS1_ECOLI 30S ribosomal protein S1 OS=Escheri... | 377 | 0.002 | 46.6 | 25 | 43 | GO:0022627; C:cytosolic small ribosomal subunit; IDA:EcoCyc.::GO:0016020; C:membrane; IDA:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:EcoCyc.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:2000766; P:negative regulation of cytoplasmic translation; IEP:EcoCyc.::GO:0006412; P:translation; IMP:EcoCyc. | 20 | P0AG68 | 557 | RS1_ECOL6 30S ribosomal protein S1 OS=Escheri... | 377 | 0.002 | 46.6 | 25 | 43 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 21 | P0AG69 | 557 | RS1_ECO57 30S ribosomal protein S1 OS=Escheri... | 377 | 0.002 | 46.6 | 25 | 43 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 22 | P37985 | 557 | RS1_DICD3 30S ribosomal protein S1 OS=Dickeya... | 272 | 0.00001 | 53.5 | 22 | 46 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 23 | Q1RJH1 | 572 | RS1_RICBR 30S ribosomal protein S1 OS=Rickett... | 355 | 0.58 | 38.1 | 21 | 40 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 24 | Q9ZKF6 | 552 | RS1_HELPJ 30S ribosomal protein S1 OS=Helicob... | 258 | 0.00002 | 52.8 | 25 | 45 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 25 | O06000 | 382 | RS1H_BACC1 30S ribosomal protein S1 homolog O... | 140 | 0.017 | 43.1 | 25 | 47 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 26 | Q49XT0 | 393 | RS1_STAS1 30S ribosomal protein S1 OS=DSM 202... | 181 | 0.00005 | 50.8 | 29 | 47 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 27 | Q4ULF1 | 568 | RS1_RICFE 30S ribosomal protein S1 OS=Rickett... | 355 | 0.012 | 43.9 | 22 | 42 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 28 | P57395 | 558 | RS1_BUCAI 30S ribosomal protein S1 OS=(Acyrth... | 265 | 0.021 | 42.7 | 23 | 42 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 29 | P56008 | 556 | RS1_HELPY 30S ribosomal protein S1 OS=pylori)... | 258 | 0.00002 | 52.8 | 25 | 45 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 30 | P46836 | 481 | RS1_MYCLE 30S ribosomal protein S1 OS=Mycobac... | 147 | 0.001 | 47 | 27 | 45 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 31 | Q97I09 | 642 | ISPH_CLOAB 4-hydroxy-3-methylbut-2-enyl dipho... | 274 | 0.000002 | 55.8 | 24 | 47 | GO:0005840; C:ribosome; IEA:InterPro. | | | | | | | | | | GO:0051538; F:3 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0051745; F:4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0019288; P:isopentenyl diphosphate biosynthetic process, mevalonate-independent pathway; IEA:InterPro.::GO:0006412; P:translation; IEA:InterPro. |
