Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
196465
Length:
1000
Number of sequences:
10438
Description:
estExt_Genewise1Plus.C_10179
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q8LHH9    1218   SHL2_ORYSJ Probable RNA-dependent RNA polymer...1600.00000000009     70.1     28     51
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0010492; P:maintenance of shoot apical meristem identity; IMP:UniProtKB.
2Q9SG02    1196   RDR6_ARATH RNA-dependent RNA polymerase 6 OS=...4880.00000004     61.2     21     37GO:0005634; C:nucleus; IDA:TAIR.
GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0048440; P:carpel development; IGI:TAIR.::GO:0048366; P:leaf development; IGI:TAIR.::GO:0010267; P:production of ta-siRNAs involved in RNA interference; IMP:TAIR.::GO:0048544; P:recognition of pollen; IMP:TAIR.::GO:0009616; P:virus induced gene silencing; IMP:TAIR.
3O82190    992   RDR3_ARATH Probable RNA-dependent RNA polymer...2210.0000002     59.3     27     44
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
4Q0DXS3    740   RDR1_ORYSJ Probable RNA-dependent RNA polymer...1990.0000007     57     26     46
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
5Q9LQV2    1107   RDR1_ARATH RNA-dependent RNA polymerase 1 OS=...1890.000001     56.6     24     43
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006952; P:defense response; IEA:UniProtKB-KW.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0060148; P:positive regulation of posttranscriptional gene silencing; IMP:TAIR.::GO:0009751; P:response to salicylic acid stimulus; IEP:TAIR.::GO:0009615; P:response to virus; IMP:TAIR.
6Q5QMN4    1183   RDR4_ORYSJ Probable RNA-dependent RNA polymer...4520.000002     55.8     23     38
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
7O14227    1215   RDR1_SCHPO RNA-dependent RNA polymerase 1 OS=...4250.000003     55.1     21     37GO:0005721; C:centromeric heterochromatin; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0031934; C:mating-type region heterochromatin; IDA:PomBase.::GO:0031380; C:nuclear RNA-directed RNA polymerase complex; IDA:PomBase.::GO:0005724; C:nuclear telomeric heterochromatin; IDA:PomBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IDA:PomBase.
GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0030702; P:chromatin silencing at centromere; IMP:PomBase.::GO:0031048; P:chromatin silencing by small RNA; IDA:PomBase.::GO:0045141; P:meiotic telomere clustering; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0031060; P:regulation of histone methylation; IMP:PomBase.
8O82188    977   RDR5_ARATH Probable RNA-dependent RNA polymer...2220.054     41.2     24     42
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
9Q7XM31    1136   RDR2_ORYSJ Probable RNA-dependent RNA polymer...1170.0005     48.1     27     48
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
10O82504    1133   RDR2_ARATH RNA-dependent RNA polymerase 2 OS=...1640.001     46.6     23     45GO:0005730; C:nucleolus; IDA:TAIR.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0007267; P:cell-cell signaling; IMP:TAIR.::GO:0050832; P:defense response to fungus; IMP:TAIR.::GO:0010495; P:long-distance posttranscriptional gene silencing; IMP:TAIR.::GO:0030422; P:production of siRNA involved in RNA interference; IMP:TAIR.
11O82189    927   RDR4_ARATH Probable RNA-dependent RNA polymer...2450.06     41.2     23     42
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
12Q5QMN5    1153   RDR3_ORYSJ Probable RNA-dependent RNA polymer...1540.005     44.7     25     45
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003968; F:RNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.
13Q940Y1    721   ORP2A_ARATH Oxysterol-binding protein-related...1382.1     35.8     27     41
GO:0005543; F:phospholipid binding; IEA:InterPro.
GO:0006869; P:lipid transport; IEA:UniProtKB-KW.
14Q74K90    671   UVRB_LACJO UvrABC system protein B OS=Lactoba...653     35.4     37     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009381; F:excinuclease ABC activity; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
15Q20065    539   P4HA2_CAEEL Prolyl 4-hydroxylase subunit alph...1157.7     33.9     26     43GO:0005788; C:endoplasmic reticulum lumen; IEA:UniProtKB-SubCell.
GO:0005506; F:iron ion binding; IEA:InterPro.::GO:0031418; F:L-ascorbic acid binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0004656; F:procollagen-proline 4-dioxygenase activity; IEA:EC.
GO:0043412; P:macromolecule modification; IDA:WormBase.
16Q9CJJ2    455   DNAA_LACLA Chromosomal replication initiator ...519.9     33.5     35     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003688; F:DNA replication origin binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006270; P:DNA-dependent DNA replication initiation; IEA:InterPro.::GO:0006275; P:regulation of DNA replication; IEA:InterPro.
records
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