Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
191111
Length:
328
Number of sequences:
10438
Description:
estExt_fgenesh2_kg.C_30118
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q9VSH4    652   CPSF6_DROME Cleavage and polyadenylation spec...1150.000000001     63.2     31     50GO:0005849; C:mRNA cleavage factor complex; ISS:FlyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006379; P:mRNA cleavage; ISS:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.
2Q6NWC6    545   CPSF6_DANRE Cleavage and polyadenylation spec...490.00000002     58.9     55     69GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.
3Q6DDW4    548   CPSF6_XENLA Cleavage and polyadenylation spec...770.00000003     58.5     34     55GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.
4Q5ZL34    551   CPSF6_CHICK Cleavage and polyadenylation spec...490.00000005     57.8     51     71GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.
5Q16630    551   CPSF6_HUMAN Cleavage and polyadenylation spec...490.00000005     57.8     51     71GO:0005849; C:mRNA cleavage factor complex; IDA:UniProtKB.::GO:0042382; C:paraspeckles; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IDA:MGI.
GO:0003729; F:mRNA binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB.::GO:0051262; P:protein tetramerization; IDA:UniProtKB.
6Q0P5D2    551   CPSF6_BOVIN Cleavage and polyadenylation spec...490.00000005     57.8     51     71GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.
7Q6NVF9    551   CPSF6_MOUSE Cleavage and polyadenylation spec...490.00000005     57.8     51     71GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.
8Q8N684    471   CPSF7_HUMAN Cleavage and polyadenylation spec...1620.0000001     56.6     27     44GO:0005849; C:mRNA cleavage factor complex; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0051262; P:protein tetramerization; IDA:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
9Q8BTV2    471   CPSF7_MOUSE Cleavage and polyadenylation spec...1620.0000003     55.1     27     43GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
10Q5XI29    462   CPSF7_RAT Cleavage and polyadenylation specif...1620.0000004     54.7     27     43GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
11Q5NVH8    552   CPSF6_PONAB Cleavage and polyadenylation spec...490.000003     52.4     49     69GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.
12P33240    577   CSTF2_HUMAN Cleavage stimulation factor subun...760.011     41.2     25     47GO:0071920; C:cleavage body; IDA:UniProtKB.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0006379; P:mRNA cleavage; TAS:ProtInc.::GO:0006378; P:mRNA polyadenylation; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
13Q5RDA3    577   CSTF2_PONAB Cleavage stimulation factor subun...760.012     41.2     25     47GO:0071920; C:cleavage body; ISS:UniProtKB.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
14Q8BIQ5    580   CSTF2_MOUSE Cleavage stimulation factor subun...760.012     40.8     25     47GO:0071920; C:cleavage body; ISS:UniProtKB.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
15Q9H0L4    616   CSTFT_HUMAN Cleavage stimulation factor subun...760.016     40.4     25     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
16Q8HXM1    572   CSTF2_BOVIN Cleavage stimulation factor subun...760.017     40.4     25     47GO:0071920; C:cleavage body; ISS:UniProtKB.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
17Q8C7E9    632   CSTFT_MOUSE Cleavage stimulation factor subun...760.031     39.7     25     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI.
GO:0006378; P:mRNA polyadenylation; TAS:MGI.
18Q9SVM8    158   GRP2_ARATH Glycine-rich RNA-binding protein 2...710.1     36.6     34     45GO:0005739; C:mitochondrion; IDA:TAIR.
GO:0005524; F:ATP binding; IDA:TAIR.::GO:0005507; F:copper ion binding; IDA:TAIR.::GO:0003690; F:double-stranded DNA binding; IDA:TAIR.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IDA:TAIR.
GO:0009409; P:response to cold; IMP:TAIR.::GO:0006970; P:response to osmotic stress; IMP:TAIR.::GO:0009845; P:seed germination; IMP:TAIR.
19Q01844    656   EWS_HUMAN RNA-binding protein EWS OS=Homo sap...1160.1     38.1     29     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005622; C:intracellular; IEA:InterPro.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
20Q61545    655   EWS_MOUSE RNA-binding protein EWS OS=Mus musc...1160.12     37.7     30     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:MGI.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
21A6NM11    1700   L37A2_HUMAN Leucine-rich repeat-containing pr...680.18     37.4     29     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
22A6NMS7    1700   L37A1_HUMAN Leucine-rich repeat-containing pr...680.18     37.4     29     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
23Q7ZX83    293   HNDLA_XENLA Heterogeneous nuclear ribonucleop...1260.38     35.8     25     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
24Q05AT9    272   U1SBP_XENLA U11/U12 small nuclear ribonucleop...650.44     35.4     35     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
25Q8DV72    342   QUEA_STRMU S-adenosylmethionine:tRNA ribosylt...920.64     35.4     30     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0016853; F:isomerase activity; IEA:UniProtKB-KW.::GO:0016740; F:transferase activity; IEA:UniProtKB-KW.
GO:0008616; P:queuosine biosynthetic process; IEA:UniProtKB-KW.
26Q9P3U1    464   YKX5_SCHPO Uncharacterized RNA-binding protei...621     34.7     32     50GO:0005829; C:cytosol; IDA:PomBase.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; ISS:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:PomBase.
GO:0016973; P:poly(A)+ mRNA export from nucleus; ISS:PomBase.
27Q640A2    297   HNRDL_XENTR Heterogeneous nuclear ribonucleop...1261.1     34.7     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
28Q9JII5    406   DAZP1_MOUSE DAZ-associated protein 1 OS=Mus m...561.2     34.3     32     45GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
29Q96EP5    407   DAZP1_HUMAN DAZ-associated protein 1 OS=Homo ...561.3     34.3     32     45GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; TAS:ProtInc.
30Q03251    169   GRP8_ARATH Glycine-rich RNA-binding protein 8...551.4     33.5     38     51GO:0005618; C:cell wall; IDA:TAIR.::GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005794; C:Golgi apparatus; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005777; C:peroxisome; IDA:TAIR.::GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; IDA:TAIR.::GO:0009737; P:response to abscisic acid stimulus; IDA:TAIR.::GO:0009409; P:response to cold; IEP:TAIR.::GO:0009651; P:response to salt stress; IEP:TAIR.::GO:0010043; P:response to zinc ion; IEP:TAIR.
31Q9LEB4    409   RBP45_NICPL Polyadenylate-binding protein RBP...571.4     34.3     32     51GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
records
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