rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
871 | Q8BTF8 | 293 | RALYL_MOUSE RNA-binding Raly-like protein OS=... | 60 | 0.87 | 36.2 | 33 | 50 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 872 | Q86U42 | 306 | PABP2_HUMAN Polyadenylate-binding protein 2 O... | 81 | 0.54 | 36.6 | 26 | 52 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0046778; P:modification by virus of host mRNA processing; TAS:Reactome.::GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006936; P:muscle contraction; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.::GO:0019058; P:viral infectious cycle; TAS:Reactome. | 873 | Q9BRL6 | 282 | SRSF8_HUMAN Serine/arginine-rich splicing fac... | 75 | 0.56 | 36.6 | 25 | 45 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 874 | Q8R4X3 | 992 | RBM12_MOUSE RNA-binding protein 12 OS=Mus mus... | 75 | 0.57 | 37.4 | 28 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 875 | Q9D8T7 | 112 | SLIRP_MOUSE SRA stem-loop-interacting RNA-bin... | 55 | 0.86 | 34.3 | 36 | 55 | GO:0005739; C:mitochondrion; IDA:MGI.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 876 | Q86SE5 | 291 | RALYL_HUMAN RNA-binding Raly-like protein OS=... | 60 | 0.96 | 35.8 | 33 | 50 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 877 | Q6ZRI0 | 2925 | OTOG_HUMAN Otogelin OS=Homo sapiens (Human). ... | 190 | 0.63 | 37.4 | 27 | 33 | GO:0016324; C:apical plasma membrane; IEA:UniProtKB-SubCell.::GO:0005615; C:extracellular space; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0046556; F:alpha-N-arabinofuranosidase activity; IEA:InterPro. | | | | | | | | | | GO:0046373; P:L-arabinose metabolic process; IEA:InterPro. | 878 | Q9CZ96 | 217 | ZCRB1_MOUSE Zinc finger CCHC-type and RNA-bin... | 89 | 1.7 | 34.7 | 22 | 47 | GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005689; C:U12-type spliceosomal complex; ISS:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 879 | A5E5Y8 | 709 | EIF3B_LODEL Eukaryotic translation initiation... | 47 | 0.68 | 37 | 36 | 62 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 880 | Q9LNV5 | 481 | C3H4_ARATH Zinc finger CCCH domain-containing... | 81 | 0.7 | 36.6 | 27 | 49 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0042742; P:defense response to bacterium; IGI:TAIR. | 881 | Q28165 | 306 | PABP2_BOVIN Polyadenylate-binding protein 2 O... | 81 | 0.71 | 36.2 | 26 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 882 | Q01064 | 536 | PDE1B_HUMAN Calcium/calmodulin-dependent 3',5... | 153 | 0.71 | 36.6 | 26 | 44 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0004117; F:calmodulin-dependent cyclic-nucleotide phosphodiesterase activity; TAS:ProtInc.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007202; P:activation of phospholipase C activity; TAS:Reactome.::GO:0006915; P:apoptotic process; TAS:ProtInc.::GO:0007596; P:blood coagulation; TAS:Reactome.::GO:0006198; P:cAMP catabolic process; IDA:UniProtKB.::GO:0097011; P:cellular response to granulocyte macrophage colony-stimulating factor stimulus; IDA:UniProtKB.::GO:0036006; P:cellular response to macrophage colony-stimulating factor stimulus; IDA:UniProtKB.::GO:0046069; P:cGMP catabolic process; IDA:UniProtKB.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0030224; P:monocyte differentiation; IEP:UniProtKB.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome. | 883 | A6QLR3 | 409 | F175B_BOVIN BRISC complex subunit Abro1 OS=Bo... | 131 | 0.73 | 36.6 | 27 | 43 | GO:0070552; C:BRISC complex; ISS:UniProtKB. | | | | | | | | | | GO:0031593; F:polyubiquitin binding; ISS:UniProtKB. | | | | | | | | | | | 884 | Q04067 | 274 | EIF3G_YEAST Eukaryotic translation initiation... | 60 | 0.75 | 36.2 | 37 | 55 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IDA:SGD. | | | | | | | | | | GO:0002188; P:translation reinitiation; IMP:SGD. | 885 | A6ZZ25 | 274 | EIF3G_YEAS7 Eukaryotic translation initiation... | 60 | 0.76 | 36.2 | 37 | 55 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 886 | O43719 | 755 | HTSF1_HUMAN HIV Tat-specific factor 1 OS=Homo... | 91 | 0.79 | 36.6 | 29 | 51 | GO:0005634; C:nucleus; IDA:HPA. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0032784; P:regulation of transcription elongation, DNA-dependent; TAS:ProtInc.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0019079; P:viral genome replication; TAS:ProtInc. | 887 | Q2QKB4 | 543 | U2A2B_WHEAT Splicing factor U2af large subuni... | 54 | 3.9 | 34.3 | 35 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 888 | O13741 | 438 | NOP12_SCHPO Nucleolar protein 12 OS=Schizosac... | 85 | 0.82 | 36.6 | 27 | 45 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; ISS:PomBase. | 889 | P38741 | 713 | RIM4_YEAST Meiotic activator RIM4 OS=Saccharo... | 80 | 0.83 | 36.6 | 30 | 48 | GO:0005737; C:cytoplasm; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IMP:SGD. | | | | | | | | | | GO:0006279; P:premeiotic DNA replication; IMP:SGD.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IGI:SGD. | 890 | Q6FVV7 | 443 | RRT5_CANGA Regulator of rDNA transcription pr... | 78 | 1 | 36.2 | 29 | 50 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 891 | Q9VWD4 | 580 | Y4230_DROME Probable RNA-binding protein CG14... | 78 | 0.95 | 36.2 | 31 | 54 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 892 | Q5RB63 | 754 | HTSF1_PONAB HIV Tat-specific factor 1 homolog... | 91 | 0.97 | 36.2 | 29 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 893 | Q54J05 | 241 | RU2B_DICDI U2 small nuclear ribonucleoprotein... | 89 | 1 | 35.4 | 25 | 52 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 894 | Q8L716 | 589 | U2A2B_ARATH Splicing factor U2af large subuni... | 61 | 8 | 33.5 | 30 | 48 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 895 | Q66II8 | 471 | RU17_XENTR U1 small nuclear ribonucleoprotein... | 75 | 1.6 | 35.4 | 21 | 44 | GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB. | 896 | Q2EG98 | 2201 | PK1L3_MOUSE Polycystic kidney disease protein... | 92 | 2.6 | 35 | 30 | 42 | GO:0016021; C:integral to membrane; IEA:UniProtKB-KW. | | | | | | | | | | GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005216; F:ion channel activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL. | | | | | | | | | | GO:0006812; P:cation transport; IDA:BHF-UCL.::GO:0071468; P:cellular response to acidity; IDA:BHF-UCL.::GO:0001581; P:detection of chemical stimulus involved in sensory perception of sour taste; IDA:BHF-UCL.::GO:0007218; P:neuropeptide signaling pathway; IEA:InterPro. | 897 | Q64395 | 199 | PDE1B_CRIGR Calcium/calmodulin-dependent 3',5... | 122 | 1.1 | 35 | 28 | 44 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004114; F:3',5'-cyclic-nucleotide phosphodiesterase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007165; P:signal transduction; IEA:InterPro. | 898 | B4MQL8 | 690 | EIF3B_DROWI Eukaryotic translation initiation... | 54 | 2.5 | 35 | 28 | 56 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; ISS:UniProtKB. | | | | | | | | | | GO:0006446; P:regulation of translational initiation; ISS:UniProtKB. | 899 | Q9ZW36 | 483 | C3H25_ARATH Zinc finger CCCH domain-containin... | 76 | 1.3 | 35.8 | 29 | 49 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 900 | Q12159 | 226 | YRA1_YEAST RNA annealing protein YRA1 OS=Sacc... | 67 | 1.3 | 35 | 25 | 55 | GO:0000346; C:transcription export complex; IPI:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:SGD. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; IGI:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:SGD. | 901 | P13824 | 443 | ARP2_PLAFA Clustered-asparagine-rich protein ... | 36 | 1.4 | 35.8 | 42 | 69 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | |