rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
721 | Q86YN6 | 1023 | PRGC2_HUMAN Peroxisome proliferator-activated... | 63 | 0.069 | 40 | 30 | 57 | GO:0016592; C:mediator complex; IDA:UniProtKB. | | | | | | | | | | GO:0050682; F:AF-2 domain binding; IPI:UniProtKB.::GO:0030331; F:estrogen receptor binding; IDA:UniProtKB.::GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IDA:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030546; F:receptor activator activity; IDA:UniProtKB.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IDA:UniProtKB. | | | | | | | | | | GO:0030520; P:intracellular estrogen receptor signaling pathway; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB. | 722 | Q6K9C3 | 200 | RZP23_ORYSJ Serine/arginine-rich splicing fac... | 61 | 0.1 | 38.5 | 28 | 54 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB. | 723 | Q6Z358 | 486 | C3H49_ORYSJ Zinc finger CCCH domain-containin... | 65 | 5.3 | 33.9 | 26 | 49 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 724 | B5DGI7 | 175 | RBM8A_SALSA RNA-binding protein 8A OS=Salmo s... | 74 | 0.05 | 38.9 | 30 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 725 | Q6C747 | 294 | EIF3G_YARLI Eukaryotic translation initiation... | 78 | 1.4 | 35.4 | 26 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 726 | Q09167 | 269 | SRSF5_RAT Serine/arginine-rich splicing facto... | 180 | 0.015 | 41.6 | 21 | 43 | GO:0016607; C:nuclear speck; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051726; P:regulation of cell cycle; IEP:RGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 727 | Q13243 | 272 | SRSF5_HUMAN Serine/arginine-rich splicing fac... | 180 | 0.016 | 41.6 | 21 | 43 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; IDA:HPA. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0006376; P:mRNA splice site selection; TAS:ProtInc.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 728 | Q6P8A7 | 226 | RBM24_XENTR RNA-binding protein 24 OS=Xenopus... | 72 | 3.6 | 33.9 | 29 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB.::GO:0010830; P:regulation of myotube differentiation; ISS:UniProtKB. | 729 | Q6DDW4 | 548 | CPSF6_XENLA Cleavage and polyadenylation spec... | 141 | 0.016 | 42 | 28 | 44 | GO:0005849; C:mRNA cleavage factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB. | 730 | A7TFW4 | 274 | EIF3G_VANPO Eukaryotic translation initiation... | 61 | 1.4 | 35.4 | 34 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 731 | O74978 | 276 | YQL5_SCHPO Uncharacterized RNA-binding protei... | 78 | 0.018 | 41.2 | 33 | 53 | GO:0005730; C:nucleolus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042254; P:ribosome biogenesis; ISS:PomBase. | 732 | Q2T9U5 | 783 | REXON_BOVIN Putative RNA exonuclease NEF-sp O... | 186 | 0.018 | 42 | 22 | 47 | | | | | | | | | | | GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 733 | P49756 | 843 | RBM25_HUMAN RNA-binding protein 25 OS=Homo sa... | 91 | 0.023 | 41.6 | 26 | 48 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0016607; C:nuclear speck; IDA:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0006915; P:apoptotic process; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 734 | Q63627 | 1048 | SFR15_RAT Splicing factor, arginine/serine-ri... | 81 | 0.019 | 42 | 28 | 51 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008022; F:protein C-terminus binding; IPI:RGD.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IMP:RGD. | 735 | B2RY56 | 841 | RBM25_MOUSE RNA-binding protein 25 OS=Mus mus... | 113 | 0.022 | 41.6 | 28 | 45 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; ISS:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006915; P:apoptotic process; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 736 | Q5ZMA3 | 225 | RBM24_CHICK RNA-binding protein 24 OS=Gallus ... | 72 | 3.2 | 33.9 | 29 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB.::GO:0010830; P:regulation of myotube differentiation; ISS:UniProtKB. | 737 | B4LM71 | 690 | EIF3B_DROVI Eukaryotic translation initiation... | 54 | 0.11 | 39.3 | 33 | 61 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; ISS:UniProtKB. | | | | | | | | | | GO:0006446; P:regulation of translational initiation; ISS:UniProtKB. | 738 | Q6GL69 | 276 | MK67I_XENTR MKI67 FHA domain-interacting nucl... | 47 | 0.69 | 36.2 | 36 | 53 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB. | 739 | P51592 | 2885 | HYD_DROME E3 ubiquitin-protein ligase hyd OS=... | 88 | 0.021 | 42 | 32 | 50 | GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005634; C:nucleus; IDA:FlyBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IBA:RefGenome.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0048749; P:compound eye development; NAS:FlyBase.::GO:0007455; P:eye-antennal disc morphogenesis; IMP:FlyBase.::GO:0008585; P:female gonad development; IMP:FlyBase.::GO:0007446; P:imaginal disc growth; IMP:FlyBase.::GO:0007112; P:male meiosis cytokinesis; IMP:FlyBase.::GO:0045879; P:negative regulation of smoothened signaling pathway; NAS:FlyBase.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IBA:RefGenome.::GO:0030162; P:regulation of proteolysis; NAS:FlyBase.::GO:0007289; P:spermatid nucleus differentiation; IMP:FlyBase. | 740 | Q7T3I7 | 214 | RBM38_XENLA RNA-binding protein 38 OS=Xenopus... | 72 | 1.6 | 34.7 | 31 | 47 | GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 741 | Q7T1H5 | 411 | DND1_DANRE Dead end protein 1 OS=Danio rerio ... | 97 | 1.6 | 35.4 | 26 | 46 | GO:0043073; C:germ cell nucleus; IDA:ZFIN.::GO:0043186; C:P granule; IDA:ZFIN. | | | | | | | | | | GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; IDA:ZFIN.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0007281; P:germ cell development; IMP:ZFIN.::GO:0008354; P:germ cell migration; IMP:ZFIN.::GO:0060047; P:heart contraction; IMP:ZFIN.::GO:0048255; P:mRNA stabilization; IMP:ZFIN.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0060965; P:negative regulation of gene silencing by miRNA; ISS:UniProtKB.::GO:0010628; P:positive regulation of gene expression; IDA:ZFIN. | 742 | O13829 | 261 | RU17_SCHPO U1 small nuclear ribonucleoprotein... | 75 | 1.5 | 35 | 25 | 48 | GO:0000243; C:commitment complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005685; C:U1 snRNP; IDA:PomBase. | | | | | | | | | | GO:0003729; F:mRNA binding; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0030619; F:U1 snRNA binding; ISS:PomBase. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:PomBase. | 743 | D3Z4I3 | 236 | RBM24_MOUSE RNA-binding protein 24 OS=Mus mus... | 72 | 1.9 | 34.7 | 31 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0043488; P:regulation of mRNA stability; IMP:UniProtKB.::GO:0010830; P:regulation of myotube differentiation; IMP:UniProtKB. | 744 | O22315 | 303 | SRSF1_ARATH Pre-mRNA-splicing factor SF2 OS=A... | 173 | 3.1 | 34.3 | 20 | 38 | GO:0035061; C:interchromatin granule; IDA:TAIR.::GO:0016607; C:nuclear speck; IDA:TAIR. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 745 | Q7SYS2 | 278 | MK67I_XENLA MKI67 FHA domain-interacting nucl... | 62 | 2.3 | 34.7 | 29 | 55 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB. | 746 | Q8SQ27 | 932 | RBM12_MACMU RNA-binding protein 12 OS=Macaca ... | 75 | 1 | 36.2 | 28 | 52 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 747 | P92966 | 356 | RSP41_ARATH Arginine/serine-rich-splicing fac... | 178 | 0.11 | 38.9 | 20 | 38 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008380; P:RNA splicing; NAS:TAIR. | 748 | Q10B98 | 312 | C3H25_ORYSJ Zinc finger CCCH domain-containin... | 82 | 3 | 34.3 | 29 | 51 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 749 | P78814 | 365 | SRP2_SCHPO Pre-mRNA-splicing factor srp2 OS=S... | 174 | 1.2 | 35.8 | 21 | 37 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:PomBase.::GO:0046982; F:protein heterodimerization activity; IPI:PomBase. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; ISS:PomBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 750 | Q5D018 | 174 | RBM8A_DANRE RNA-binding protein 8A OS=Danio r... | 72 | 0.038 | 39.3 | 29 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 751 | B3ME25 | 686 | EIF3B_DROAN Eukaryotic translation initiation... | 57 | 0.066 | 40 | 28 | 56 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; ISS:UniProtKB. | | | | | | | | | | GO:0006446; P:regulation of translational initiation; ISS:UniProtKB. |