rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
31 | Q6DEY7 | 629 | EPAB_XENTR Embryonic polyadenylate-binding pr... | 649 | 0 | 576 | 50 | 63 | GO:0005737; C:cytoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0031370; F:eukaryotic initiation factor 4G binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.::GO:0043621; F:protein self-association; ISS:UniProtKB. | | | | | | | | | | GO:0043009; P:chordate embryonic development; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0006412; P:translation; IEA:UniProtKB-KW. | 32 | Q74ZS6 | 585 | PABP_ASHGO Polyadenylate-binding protein, cyt... | 58 | 0.008 | 43.1 | 36 | 62 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 33 | Q98SP8 | 629 | EPABA_XENLA Embryonic polyadenylate-binding p... | 644 | 0 | 562 | 50 | 63 | GO:0005737; C:cytoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0031370; F:eukaryotic initiation factor 4G binding; IPI:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB.::GO:0043621; F:protein self-association; IPI:UniProtKB. | | | | | | | | | | GO:0043009; P:chordate embryonic development; IEP:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048255; P:mRNA stabilization; IDA:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; IDA:UniProtKB.::GO:0006412; P:translation; IEA:UniProtKB-KW. | 34 | Q6GR16 | 629 | EPABB_XENLA Embryonic polyadenylate-binding p... | 84 | 0.00005 | 50.1 | 32 | 55 | GO:0005737; C:cytoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0031370; F:eukaryotic initiation factor 4G binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.::GO:0043621; F:protein self-association; ISS:UniProtKB. | | | | | | | | | | GO:0043009; P:chordate embryonic development; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0006412; P:translation; IEA:UniProtKB-KW. | 35 | Q9H361 | 631 | PABP3_HUMAN Polyadenylate-binding protein 3 O... | 652 | 0 | 556 | 48 | 63 | GO:0005737; C:cytoplasm; NAS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0016071; P:mRNA metabolic process; NAS:UniProtKB. | 36 | Q4VXU2 | 614 | PAP1L_HUMAN Polyadenylate-binding protein 1-l... | 631 | 0 | 554 | 48 | 62 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 37 | P21187 | 634 | PABP_DROME Polyadenylate-binding protein OS=D... | 666 | 8e-180 | 533 | 47 | 59 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005811; C:lipid particle; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:FlyBase.::GO:0005515; F:protein binding; IPI:FlyBase. | | | | | | | | | | GO:0009953; P:dorsal/ventral pattern formation; IMP:FlyBase.::GO:0007140; P:male meiosis; IMP:FlyBase.::GO:0007112; P:male meiosis cytokinesis; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0048599; P:oocyte development; IMP:FlyBase.::GO:0045727; P:positive regulation of translation; IGI:FlyBase.::GO:0007289; P:spermatid nucleus differentiation; IMP:FlyBase.::GO:0007268; P:synaptic transmission; IMP:FlyBase. | 38 | P04147 | 577 | PABP_YEAST Polyadenylate-binding protein, cyt... | 462 | 7e-179 | 528 | 57 | 75 | GO:0010494; C:cytoplasmic stress granule; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0005840; C:ribosome; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IMP:SGD. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0060211; P:regulation of nuclear-transcribed mRNA poly(A) tail shortening; IMP:SGD.::GO:0006446; P:regulation of translational initiation; IMP:SGD. | 39 | Q6FKG4 | 579 | PABP_CANGA Polyadenylate-binding protein, cyt... | 113 | 0.005 | 43.9 | 28 | 47 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 40 | Q6CSV3 | 592 | PABP_KLULA Polyadenylate-binding protein, cyt... | 148 | 0.017 | 42 | 28 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 41 | Q54BM2 | 565 | PAP1A_DICDI Polyadenylate-binding protein 1-A... | 628 | 2e-170 | 506 | 47 | 61 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:dictyBase. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:dictyBase. | 42 | P42731 | 629 | PABP2_ARATH Polyadenylate-binding protein 2 O... | 640 | 5e-165 | 494 | 44 | 60 | GO:0005829; C:cytosol; IDA:TAIR. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009651; P:response to salt stress; IEP:TAIR. | 43 | Q05196 | 682 | PABP5_ARATH Polyadenylate-binding protein 5 O... | 641 | 4e-162 | 489 | 44 | 60 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:TAIR. | | | | | | | | | | GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IGI:TAIR.::GO:0006413; P:translational initiation; IGI:TAIR. | 44 | O64380 | 660 | PABP3_ARATH Polyadenylate-binding protein 3 O... | 663 | 3e-158 | 478 | 43 | 58 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IGI:TAIR. | 45 | P0CB38 | 370 | PAB4L_HUMAN Polyadenylate-binding protein 4-l... | 84 | 0.005 | 43.1 | 31 | 54 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 46 | Q9ZQA8 | 609 | PABPX_ARATH Probable polyadenylate-binding pr... | 589 | 5e-47 | 179 | 26 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 47 | P60050 | 382 | PABP5_PONPY Polyadenylate-binding protein 5 O... | 374 | 5e-112 | 349 | 51 | 69 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 48 | P60049 | 382 | PABP5_PANTR Polyadenylate-binding protein 5 O... | 374 | 5e-112 | 349 | 51 | 69 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 49 | P60048 | 382 | PABP5_HYLLA Polyadenylate-binding protein 5 O... | 374 | 5e-112 | 349 | 51 | 69 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 50 | Q96DU9 | 382 | PABP5_HUMAN Polyadenylate-binding protein 5 O... | 374 | 5e-112 | 349 | 51 | 69 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 51 | P60047 | 382 | PABP5_GORGO Polyadenylate-binding protein 5 O... | 374 | 5e-112 | 349 | 51 | 69 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 52 | Q7JGR2 | 382 | PABP5_MACMU Polyadenylate-binding protein 5 O... | 374 | 6e-112 | 349 | 51 | 69 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 53 | Q1ZXC2 | 814 | PAP1B_DICDI Polyadenylate-binding protein 1-B... | 202 | 9e-19 | 94.7 | 33 | 53 | GO:0005737; C:cytoplasm; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:dictyBase. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; ISS:dictyBase. | 54 | Q5JQF8 | 200 | PAP1M_HUMAN Polyadenylate-binding protein 1-l... | 177 | 3e-16 | 82.4 | 33 | 54 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 55 | Q8SR30 | 502 | PABP_ENCCU Polyadenylate-binding protein, cyt... | 387 | 2e-62 | 221 | 36 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006417; P:regulation of translation; IEA:UniProtKB-KW. | 56 | P39684 | 611 | PES4_YEAST Protein PES4 OS=Saccharomyces cere... | 311 | 0.00000007 | 59.3 | 25 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 57 | O14102 | 335 | SAP49_SCHPO Spliceosome-associated protein 49... | 96 | 0.00002 | 50.4 | 31 | 55 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005686; C:U2 snRNP; ISS:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; TAS:PomBase. | 58 | P38760 | 659 | MIP6_YEAST RNA-binding protein MIP6 OS=Saccha... | 93 | 0.4 | 37.7 | 29 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IPI:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; IPI:SGD. | 59 | Q28GD4 | 375 | ELAV2_XENTR ELAV-like protein 2 OS=Xenopus tr... | 77 | 0.000003 | 53.5 | 36 | 58 | GO:0005938; C:cell cortex; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW. | 60 | Q5R9Z6 | 359 | ELAV2_PONAB ELAV-like protein 2 OS=Pongo abel... | 81 | 0.17 | 38.5 | 28 | 48 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 61 | Q12926 | 359 | ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapie... | 81 | 0.17 | 38.5 | 28 | 48 | | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; TAS:ProtInc. |