rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
151 | B3M3R5 | 597 | SHEP_DROAN Protein alan shepard OS=Drosophila... | 183 | 0.0000000000004 | 76.3 | 26 | 46 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009629; P:response to gravity; ISS:UniProtKB. | 152 | Q99181 | 213 | HSH49_YEAST Protein HSH49 OS=Saccharomyces ce... | 181 | 0.0001 | 47.8 | 24 | 47 | GO:0005686; C:U2 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:SGD. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD. | 153 | O61374 | 348 | SXL_CERCA Sex-lethal homolog OS=Ceratitis cap... | 71 | 0.49 | 37 | 28 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 154 | Q6Z1C0 | 572 | NUCL1_ORYSJ Nucleolin 1 OS=Oryza sativa subsp... | 195 | 0.000001 | 55.1 | 23 | 46 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 155 | B4QRJ0 | 576 | SHEP_DROSI Protein alan shepard OS=Drosophila... | 150 | 0.000005 | 53.5 | 24 | 43 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0009629; P:response to gravity; ISS:UniProtKB. | 156 | Q8T6B9 | 637 | PUF68_DROME Poly(U)-binding-splicing factor h... | 181 | 0.00000000004 | 69.7 | 26 | 50 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; ISS:FlyBase.::GO:0005515; F:protein binding; IPI:FlyBase. | | | | | | | | | | GO:0000380; P:alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.::GO:0007282; P:cystoblast division; IMP:FlyBase.::GO:0006376; P:mRNA splice site selection; IMP:FlyBase.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.::GO:0001558; P:regulation of cell growth; IMP:FlyBase. | 157 | Q8TBY0 | 533 | RBM46_HUMAN Probable RNA-binding protein 46 O... | 307 | 0.0000000000002 | 76.6 | 26 | 44 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 158 | O94432 | 474 | YHKF_SCHPO Uncharacterized RNA-binding protei... | 69 | 2.4 | 35 | 28 | 42 | GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0005849; C:mRNA cleavage factor complex; ISS:PomBase. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; NAS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase. | 159 | P20397 | 651 | NUCL_XENLA Nucleolin OS=Xenopus laevis (Afric... | 96 | 0.007 | 43.1 | 30 | 54 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 160 | Q02926 | 471 | RB97D_DROME Ribonucleoprotein RB97D OS=Drosop... | 151 | 0.00000003 | 60.1 | 27 | 48 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007286; P:spermatid development; IMP:FlyBase. | 161 | P86049 | 533 | RBM46_MOUSE Probable RNA-binding protein 46 O... | 307 | 0.0000000000003 | 76.6 | 26 | 44 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 162 | Q94901 | 352 | LARK_DROME RNA-binding protein lark OS=Drosop... | 172 | 0.0000003 | 56.6 | 24 | 42 | GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030036; P:actin cytoskeleton organization; IMP:UniProtKB.::GO:0007303; P:cytoplasmic transport, nurse cell to oocyte; IMP:UniProtKB.::GO:0008062; P:eclosion rhythm; IMP:UniProtKB.::GO:0009790; P:embryo development; IMP:UniProtKB.::GO:0045475; P:locomotor rhythm; TAS:FlyBase.::GO:0007067; P:mitosis; IMP:FlyBase.::GO:0045804; P:negative regulation of eclosion; IMP:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0008104; P:protein localization; IMP:UniProtKB. | 163 | P48809 | 421 | RB27C_DROME Heterogeneous nuclear ribonucleop... | 57 | 0.008 | 42.7 | 35 | 51 | GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005654; C:nucleoplasm; IDA:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.::GO:0030529; C:ribonucleoprotein complex; IDA:FlyBase. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:FlyBase.::GO:0048027; F:mRNA 5'-UTR binding; NAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:FlyBase.::GO:0003697; F:single-stranded DNA binding; IDA:FlyBase. | | | | | | | | | | GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0007298; P:border follicle cell migration; IMP:FlyBase.::GO:0007319; P:negative regulation of oskar mRNA translation; TAS:FlyBase.::GO:0045451; P:pole plasm oskar mRNA localization; IMP:FlyBase.::GO:0045727; P:positive regulation of translation; IDA:FlyBase.::GO:0048024; P:regulation of nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 164 | P82277 | 260 | RRP2_SPIOL 30S ribosomal protein 2, chloropla... | 72 | 0.006 | 42.7 | 31 | 58 | GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0019843; F:rRNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 165 | O04425 | 747 | FCA_ARATH Flowering time control protein FCA ... | 216 | 0.0000000002 | 67.8 | 26 | 43 | GO:0000785; C:chromatin; TAS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:TAIR. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031048; P:chromatin silencing by small RNA; IMP:TAIR.::GO:0009790; P:embryo development; IGI:TAIR.::GO:0009553; P:embryo sac development; IGI:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0009909; P:regulation of flower development; IMP:TAIR. | 166 | Q4R2Z0 | 485 | RBM46_MACFA Probable RNA-binding protein 46 O... | 307 | 0.000000000001 | 74.3 | 26 | 44 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 167 | Q06106 | 887 | MRD1_YEAST Multiple RNA-binding domain-contai... | 102 | 4.4 | 34.3 | 27 | 49 | GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0034462; P:small-subunit processome assembly; IMP:SGD. | 168 | Q9NW13 | 759 | RBM28_HUMAN RNA-binding protein 28 OS=Homo sa... | 333 | 0.001 | 45.4 | 23 | 39 | GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 169 | P25555 | 427 | GBP2_YEAST Single-strand telomeric DNA-bindin... | 308 | 0.00000009 | 58.5 | 24 | 41 | GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0010494; C:cytoplasmic stress granule; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0042162; F:telomeric DNA binding; IMP:SGD. | | | | | | | | | | GO:0016973; P:poly(A)+ mRNA export from nucleus; IPI:SGD.::GO:0000723; P:telomere maintenance; IDA:SGD. | 170 | P27476 | 414 | NSR1_YEAST Nuclear localization sequence-bind... | 182 | 0.00002 | 51.2 | 21 | 46 | GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005730; C:nucleolus; TAS:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0003697; F:single-stranded DNA binding; IDA:SGD. | | | | | | | | | | GO:0006950; P:response to stress; IEA:UniProtKB-KW.::GO:0000028; P:ribosomal small subunit assembly; TAS:SGD.::GO:0006364; P:rRNA processing; TAS:SGD. | 171 | Q8LPQ9 | 901 | FPA_ARATH Flowering time control protein FPA ... | 152 | 0.018 | 42 | 23 | 43 | GO:0000785; C:chromatin; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031048; P:chromatin silencing by small RNA; IMP:TAIR.::GO:0009790; P:embryo development; IGI:TAIR.::GO:0009553; P:embryo sac development; IGI:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006378; P:mRNA polyadenylation; IDA:UniProtKB.::GO:0009911; P:positive regulation of flower development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010228; P:vegetative to reproductive phase transition of meristem; IMP:TAIR. | 172 | Q62826 | 690 | HNRPM_RAT Heterogeneous nuclear ribonucleopro... | 73 | 0.071 | 40 | 30 | 51 | GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003823; F:antigen binding; IMP:RGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0003723; F:RNA binding; TAS:RGD. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro. | 173 | Q8IY67 | 606 | RAVR1_HUMAN Ribonucleoprotein PTB-binding 1 O... | 165 | 0.0000003 | 57.4 | 25 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 174 | Q9NQ94 | 594 | A1CF_HUMAN APOBEC1 complementation factor OS=... | 68 | 0.0002 | 48.1 | 34 | 54 | GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; IDA:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003727; F:single-stranded RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0016554; P:cytidine to uridine editing; TAS:Reactome.::GO:0016556; P:mRNA modification; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; IDA:UniProtKB. | 175 | Q5R9H4 | 587 | A1CF_PONAB APOBEC1 complementation factor OS=... | 68 | 0.0002 | 48.1 | 34 | 54 | GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; ISS:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003727; F:single-stranded RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; ISS:UniProtKB. | 176 | Q91WT8 | 590 | RBM47_MOUSE RNA-binding protein 47 OS=Mus mus... | 68 | 0.0001 | 48.9 | 32 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 177 | Q66H68 | 590 | RBM47_RAT RNA-binding protein 47 OS=Rattus no... | 68 | 0.0001 | 48.9 | 32 | 54 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 178 | Q5BGA9 | 819 | MRD1_EMENI Multiple RNA-binding domain-contai... | 426 | 0.0004 | 47.4 | 22 | 35 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 179 | Q6FXP4 | 861 | MRD1_CANGA Multiple RNA-binding domain-contai... | 216 | 3.6 | 34.7 | 21 | 38 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 180 | Q8R3C6 | 952 | RBM19_MOUSE Probable RNA-binding protein 19 O... | 171 | 0.064 | 40.4 | 23 | 40 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0040019; P:positive regulation of embryonic development; IMP:UniProtKB. | 181 | Q5RC80 | 524 | RBM39_PONAB RNA-binding protein 39 OS=Pongo a... | 195 | 0.0000006 | 56.2 | 25 | 46 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. |