| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q92373 | 279 | RFA2_SCHPO Replication factor A protein 2 OS=... | 115 | 0.0005 | 42.4 | 24 | 40 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005662; C:DNA replication factor A complex; IDA:PomBase. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0065007; P:biological regulation; NAS:PomBase.::GO:0006310; P:DNA recombination; ISS:PomBase.::GO:0006281; P:DNA repair; ISS:PomBase.::GO:0006269; P:DNA replication, synthesis of RNA primer; ISS:PomBase. | 2 | P26754 | 273 | RFA2_YEAST Replication factor A protein 2 OS=... | 83 | 0.057 | 36.6 | 25 | 46 | GO:0000781; C:chromosome, telomeric region; IMP:SGD.::GO:0000794; C:condensed nuclear chromosome; IDA:SGD.::GO:0005662; C:DNA replication factor A complex; IDA:SGD. | | | | | | | | | | GO:0003690; F:double-stranded DNA binding; IDA:SGD.::GO:0043565; F:sequence-specific DNA binding; IDA:SGD.::GO:0003697; F:single-stranded DNA binding; IDA:SGD. | | | | | | | | | | GO:0006268; P:DNA unwinding involved in replication; IDA:SGD.::GO:0000724; P:double-strand break repair via homologous recombination; IGI:SGD.::GO:0045184; P:establishment of protein localization; IMP:SGD.::GO:0030491; P:heteroduplex formation; IDA:SGD.::GO:0006289; P:nucleotide-excision repair; IMP:SGD.::GO:0016567; P:protein ubiquitination; IPI:SGD.::GO:0007131; P:reciprocal meiotic recombination; IPI:SGD.::GO:0000722; P:telomere maintenance via recombination; IPI:SGD.::GO:0007004; P:telomere maintenance via telomerase; IMP:SGD. | 3 | Q8CUG1 | 317 | YHAM_OCEIH 3'-5' exoribonuclease yhaM OS=HTE8... | 57 | 0.16 | 35.4 | 35 | 49 | | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:InterPro.::GO:0008081; F:phosphoric diester hydrolase activity; IEA:InterPro. | | | | | | | | | | | 4 | Q63528 | 270 | RFA2_RAT Replication protein A 32 kDa subunit... | 95 | 0.48 | 33.9 | 25 | 46 | GO:0005662; C:DNA replication factor A complex; IDA:RGD.::GO:0016605; C:PML body; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0047485; F:protein N-terminus binding; IMP:RGD.::GO:0003697; F:single-stranded DNA binding; IDA:RGD. | | | | | | | | | | GO:0006284; P:base-excision repair; NAS:RGD.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IC:RGD.::GO:0010569; P:regulation of double-strand break repair via homologous recombination; ISS:UniProtKB. | 5 | C0QA05 | 492 | DER_DESAH GTPase Der OS=Desulfobacterium auto... | 99 | 0.57 | 33.9 | 31 | 48 | | | | | | | | | | | GO:0005525; F:GTP binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW. | 6 | Q62193 | 270 | RFA2_MOUSE Replication protein A 32 kDa subun... | 59 | 0.94 | 33.1 | 29 | 51 | GO:0016605; C:PML body; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0010569; P:regulation of double-strand break repair via homologous recombination; ISS:UniProtKB. | 7 | C5D6L2 | 324 | YHAM_GEOSW 3'-5' exoribonuclease yhaM OS=Geob... | 57 | 0.98 | 33.1 | 39 | 47 | | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008081; F:phosphoric diester hydrolase activity; IEA:InterPro. | | | | | | | | | | | 8 | Q9V2F3 | 619 | DP2S_PYRAB DNA polymerase II small subunit OS... | 89 | 5.1 | 30.8 | 26 | 52 | | | | | | | | | | | GO:0008408; F:3'-5' exonuclease activity; IEA:HAMAP.::GO:0003677; F:DNA binding; IEA:HAMAP.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:HAMAP. | | | | | | | | | | GO:0000738; P:DNA catabolic process, exonucleolytic; IEA:HAMAP.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006261; P:DNA-dependent DNA replication; IEA:HAMAP. | 9 | Q13156 | 261 | RFA4_HUMAN Replication protein A 30 kDa subun... | 84 | 6.1 | 30.4 | 24 | 55 | GO:0005662; C:DNA replication factor A complex; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0003697; F:single-stranded DNA binding; TAS:ProtInc. | | | | | | | | | | GO:0000077; P:DNA damage checkpoint; IDA:UniProtKB.::GO:0006270; P:DNA-dependent DNA replication initiation; TAS:ProtInc.::GO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome.::GO:0000216; P:M/G1 transition of mitotic cell cycle; TAS:Reactome.::GO:0006289; P:nucleotide-excision repair; IDA:UniProtKB. | 10 | O13974 | 329 | OTU1_SCHPO Putative ubiquitin thioesterase ot... | 73 | 8.1 | 30 | 30 | 42 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.::GO:0004843; F:ubiquitin-specific protease activity; IDA:PomBase. | | | | | | | | | | GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0016579; P:protein deubiquitination; IDA:PomBase.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW. |
