Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
190388
Length:
289
Number of sequences:
10438
Description:
estExt_fgenesh2_kg.C_20264
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451P62997    288   TRA2B_RAT Transformer-2 protein homolog beta ...930.34     35.8     32     45GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:RGD.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000302; P:response to reactive oxygen species; IEP:RGD.
452P62996    288   TRA2B_MOUSE Transformer-2 protein homolog bet...930.34     35.8     32     45GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.
453P62995    288   TRA2B_HUMAN Transformer-2 protein homolog bet...930.34     35.8     32     45GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003729; F:mRNA binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.
454Q3ZBT6    288   TRA2B_BOVIN Transformer-2 protein homolog bet...930.34     35.8     32     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.
455P92204    280   NELFE_DROME Negative elongation factor E OS=D...941.2     33.9     29     48GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0032021; C:NELF complex; IPI:FlyBase.::GO:0017053; C:transcriptional repressor complex; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:UniProtKB.
GO:0034244; P:negative regulation of transcription elongation from RNA polymerase II promoter; IDA:FlyBase.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IDA:UniProtKB.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:UniProtKB.
456Q28HE9    490   CELF1_XENTR CUGBP Elav-like family member 1 O...791.1     34.3     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
457Q9Y388    322   RBMX2_HUMAN RNA-binding motif protein, X-link...1060.026     39.3     25     41
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
458P28659    486   CELF1_MOUSE CUGBP Elav-like family member 1 O...620.031     39.3     27     52GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0042835; F:BRE binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0031369; F:translation initiation factor binding; IDA:MGI.
GO:0006376; P:mRNA splice site selection; IDA:MGI.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:MGI.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0007286; P:spermatid development; IMP:MGI.
459Q4QQT3    487   CELF1_RAT CUGBP Elav-like family member 1 OS=...620.031     39.3     27     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.
460Q9HCJ3    691   RAVR2_HUMAN Ribonucleoprotein PTB-binding 2 O...1250.25     36.6     21     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
461Q6PH90    174   RB8AB_XENLA RNA-binding protein 8A-B OS=Xenop...830.12     36.6     31     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
462Q32P51    320   RA1L2_HUMAN Heterogeneous nuclear ribonucleop...610.029     39.3     30     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
463P49311    169   GRP2_SINAL Glycine-rich RNA-binding protein G...770.03     38.1     27     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
464Q92879    486   CELF1_HUMAN CUGBP Elav-like family member 1 O...620.032     39.3     27     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; NAS:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; NAS:UniProtKB.
GO:0042835; F:BRE binding; IDA:UniProtKB.::GO:0003729; F:mRNA binding; IDA:BHF-UCL.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0000900; F:translation repressor activity, nucleic acid binding; NAS:UniProtKB.
GO:0009790; P:embryo development; NAS:UniProtKB.::GO:0007281; P:germ cell development; NAS:UniProtKB.::GO:0006376; P:mRNA splice site selection; ISS:UniProtKB.::GO:0043484; P:regulation of RNA splicing; IDA:UniProtKB.::GO:0016246; P:RNA interference; NAS:UniProtKB.
465O61374    348   SXL_CERCA Sex-lethal homolog OS=Ceratitis cap...1830.031     39.3     23     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
466Q6DJI9    218   ZCRB1_XENLA Zinc finger CCHC-type and RNA-bin...780.031     38.5     23     42GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
467Q5R995    513   CELF1_PONAB CUGBP Elav-like family member 1 O...790.093     37.7     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
468Q93W34    415   RP45C_ARATH Polyadenylate-binding protein RBP...1780.033     39.3     22     43GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
469Q7TPD6    673   RAVR2_MOUSE Ribonucleoprotein PTB-binding 2 O...1631.6     33.9     20     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:MGI.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
470Q13283    466   G3BP1_HUMAN Ras GTPase-activating protein-bin...660.033     39.3     27     53GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; TAS:ProtInc.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; TAS:ProtInc.::GO:0004004; F:ATP-dependent RNA helicase activity; TAS:ProtInc.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007265; P:Ras protein signal transduction; TAS:ProtInc.::GO:0006810; P:transport; IEA:UniProtKB-KW.
471Q32LC7    465   G3BP1_BOVIN Ras GTPase-activating protein-bin...660.034     39.3     27     53GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006810; P:transport; IEA:UniProtKB-KW.
472Q4PC17    858   MRD1_USTMA Multiple RNA-binding domain-contai...700.24     36.6     29     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
473P38760    659   MIP6_YEAST RNA-binding protein MIP6 OS=Saccha...1870.035     39.3     20     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IPI:SGD.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006406; P:mRNA export from nucleus; IPI:SGD.
474Q9VVE5    369   MSIR6_DROME RNA-binding protein Musashi homol...1792.8     33.1     21     41GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005844; C:polysome; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; ISS:UniProtKB.
GO:0048864; P:stem cell development; ISS:UniProtKB.
475Q8VC70    383   RBMS2_MOUSE RNA-binding motif, single-strande...600.035     38.9     30     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
476Q5RB87    466   G3BP1_PONAB Ras GTPase-activating protein-bin...660.035     39.3     27     53GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006810; P:transport; IEA:UniProtKB-KW.
477O81126    200   RZP22_ARATH Serine/arginine-rich splicing fac...600.038     38.1     32     55GO:0016607; C:nuclear speck; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:TAIR.
478Q9DF42    174   RB8AA_XENLA RNA-binding protein 8A-A OS=Xenop...830.13     36.6     31     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
479Q99729    332   ROAA_HUMAN Heterogeneous nuclear ribonucleopr...580.038     38.9     26     52GO:0005737; C:cytoplasm; ISS:HGNC.::GO:0005634; C:nucleus; ISS:HGNC.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB.
GO:0003729; F:mRNA binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0001837; P:epithelial to mesenchymal transition; ISS:HGNC.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:HGNC.
480A5A6H4    320   ROA1_PANTR Heterogeneous nuclear ribonucleopr...1380.038     38.9     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
481P49312    320   ROA1_MOUSE Heterogeneous nuclear ribonucleopr...1380.038     38.9     25     43GO:0005737; C:cytoplasm; ISS:HGNC.::GO:0005654; C:nucleoplasm; ISS:HGNC.::GO:0005681; C:spliceosomal complex; ISS:HGNC.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; ISS:HGNC.
GO:0000380; P:alternative nuclear mRNA splicing, via spliceosome; IDA:MGI.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0051168; P:nuclear export; ISS:HGNC.::GO:0051170; P:nuclear import; ISS:HGNC.
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