rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
391 | Q9QZI7 | 287 | TSAP1_RAT tRNA selenocysteine 1-associated pr... | 182 | 0.01 | 40.4 | 23 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0000049; F:tRNA binding; IDA:RGD. | | | | | | | | | | GO:0001514; P:selenocysteine incorporation; ISS:HGNC. | 392 | Q1RMJ7 | 287 | TSAP1_BOVIN tRNA selenocysteine 1-associated ... | 182 | 0.01 | 40.4 | 23 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 393 | Q10572 | 415 | FOX1_CAEEL Sex determination protein fox-1 OS... | 76 | 0.01 | 40.8 | 33 | 49 | GO:0005634; C:nucleus; IDA:WormBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003727; F:single-stranded RNA binding; IDA:WormBase. | | | | | | | | | | GO:0042464; P:dosage compensation by hypoactivation of X chromosome; IGI:WormBase.::GO:0007617; P:mating behavior; IMP:WormBase.::GO:0016071; P:mRNA metabolic process; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase. | 394 | Q06106 | 887 | MRD1_YEAST Multiple RNA-binding domain-contai... | 76 | 0.011 | 40.8 | 33 | 55 | GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0034462; P:small-subunit processome assembly; IMP:SGD. | 395 | Q61474 | 362 | MSI1H_MOUSE RNA-binding protein Musashi homol... | 179 | 2.3 | 33.1 | 21 | 42 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.::GO:0005844; C:polysome; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:MGI. | | | | | | | | | | | 396 | Q5R462 | 287 | TSAP1_PONAB tRNA selenocysteine 1-associated ... | 182 | 0.011 | 40.4 | 23 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006412; P:translation; IEA:UniProtKB-KW. | 397 | Q8K3P4 | 362 | MSI1H_RAT RNA-binding protein Musashi homolog... | 179 | 2.4 | 33.1 | 21 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | GO:0030855; P:epithelial cell differentiation; IEP:RGD.::GO:0009725; P:response to hormone stimulus; IMP:RGD. | 398 | Q9SX80 | 434 | R47CP_ARATH Polyadenylate-binding protein RBP... | 210 | 0.15 | 37 | 21 | 43 | GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0034605; P:cellular response to heat; ISS:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 399 | Q80VC6 | 287 | TSAP1_MOUSE tRNA selenocysteine 1-associated ... | 182 | 0.011 | 40.4 | 23 | 39 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:HGNC. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:HGNC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0001514; P:selenocysteine incorporation; IDA:HGNC. | 400 | Q9FPJ8 | 387 | RB45A_ARATH Polyadenylate-binding protein RBP... | 177 | 7.8 | 31.6 | 23 | 39 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 401 | O15042 | 1029 | SR140_HUMAN U2 snRNP-associated SURP motif-co... | 82 | 0.012 | 40.8 | 28 | 44 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 402 | Q5R7X2 | 1028 | SR140_PONAB U2 snRNP-associated SURP motif-co... | 82 | 0.012 | 40.8 | 28 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 403 | Q6NV83 | 1029 | SR140_MOUSE U2 snRNP-associated SURP motif-co... | 82 | 0.012 | 40.8 | 28 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006396; P:RNA processing; IEA:InterPro. | 404 | Q792H5 | 508 | CELF2_RAT CUGBP Elav-like family member 2 OS=... | 79 | 0.029 | 39.3 | 29 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:RGD. | | | | | | | | | | | 405 | Q9Z0H4 | 508 | CELF2_MOUSE CUGBP Elav-like family member 2 O... | 79 | 0.029 | 39.3 | 29 | 49 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006376; P:mRNA splice site selection; IDA:MGI. | 406 | Q8JIY8 | 269 | MK67I_DANRE MKI67 FHA domain-interacting nucl... | 71 | 0.012 | 40 | 32 | 49 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB. | 407 | Q5JQF8 | 200 | PAP1M_HUMAN Polyadenylate-binding protein 1-l... | 169 | 0.016 | 39.3 | 22 | 41 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 408 | Q5R8Y8 | 508 | CELF2_PONAB CUGBP Elav-like family member 2 O... | 79 | 0.03 | 39.3 | 29 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 409 | O95319 | 508 | CELF2_HUMAN CUGBP Elav-like family member 2 O... | 79 | 0.03 | 39.3 | 29 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008016; P:regulation of heart contraction; TAS:ProtInc. | 410 | Q96DH6 | 328 | MSI2H_HUMAN RNA-binding protein Musashi homol... | 179 | 0.16 | 37 | 22 | 42 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro. | | | | | | | | | | | 411 | A4IIM2 | 513 | CELF2_XENTR CUGBP Elav-like family member 2 O... | 79 | 0.035 | 39.3 | 29 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 412 | Q1LZD9 | 520 | PSPC1_BOVIN Paraspeckle component 1 OS=Bos ta... | 204 | 0.014 | 40.4 | 25 | 41 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016363; C:nuclear matrix; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 413 | P21522 | 342 | ROA1_SCHAM Heterogeneous nuclear ribonucleopr... | 144 | 0.014 | 40 | 28 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 414 | Q920Q6 | 346 | MSI2H_MOUSE RNA-binding protein Musashi homol... | 179 | 0.19 | 36.6 | 22 | 42 | GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005844; C:polysome; IDA:MGI. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:MGI. | | | | | | | | | | GO:0048864; P:stem cell development; IMP:UniProtKB. | 415 | Q7ZXE2 | 536 | CELF2_XENLA CUGBP Elav-like family member 2 O... | 79 | 0.04 | 38.9 | 29 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 416 | Q7T2T1 | 484 | CELF2_CHICK CUGBP Elav-like family member 2 O... | 79 | 0.042 | 38.9 | 29 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 417 | O60506 | 623 | HNRPQ_HUMAN Heterogeneous nuclear ribonucleop... | 65 | 0.12 | 37.4 | 28 | 52 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0070937; C:CRD-mediated mRNA stability complex; IDA:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0071204; C:histone pre-mRNA 3'end processing complex; ISS:UniProtKB.::GO:0005792; C:microsome; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0070934; P:CRD-mediated mRNA stabilization; IMP:UniProtKB.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB. | 418 | P0CR16 | 769 | MRD1_CRYNJ Multiple RNA-binding domain-contai... | 149 | 0.63 | 35.4 | 20 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 419 | P0CR17 | 769 | MRD1_CRYNB Multiple RNA-binding domain-contai... | 149 | 0.63 | 35.4 | 20 | 44 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 420 | Q2HJG2 | 530 | PUF60_BOVIN Poly(U)-binding-splicing factor P... | 179 | 0.016 | 40.4 | 26 | 43 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 421 | Q5R723 | 301 | PPIE_PONAB Peptidyl-prolyl cis-trans isomeras... | 83 | 0.016 | 40 | 33 | 43 | GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |