Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
189771
Length:
469
Number of sequences:
10438
Description:
estExt_fgenesh2_kg.C_10652
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241Q6C2Q7    509   NOP12_YARLI Nucleolar protein 12 OS=lipolytic...1970.0003     46.6     27     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
242Q8BWL5    431   RBMS3_MOUSE RNA-binding motif, single-strande...1940.0004     46.2     19     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
243Q5RBU8    353   ROA2_PONAB Heterogeneous nuclear ribonucleopr...1750.0004     46.2     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
244O88569    353   ROA2_MOUSE Heterogeneous nuclear ribonucleopr...1750.0004     46.2     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; ISS:HGNC.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:HGNC.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0097157; F:pre-mRNA intronic binding; IDA:MGI.::GO:0043047; F:single-stranded telomeric DNA binding; ISS:HGNC.
GO:0006397; P:mRNA processing; ISS:HGNC.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0050658; P:RNA transport; ISS:HGNC.
245P22626    353   ROA2_HUMAN Heterogeneous nuclear ribonucleopr...1750.0004     46.2     23     42GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; IDA:HGNC.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IDA:HGNC.::GO:0043047; F:single-stranded telomeric DNA binding; IDA:HGNC.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0050658; P:RNA transport; IDA:HGNC.
246Q9P6P7    422   YKCG_SCHPO Uncharacterized RNA-binding protei...860.0004     46.2     31     53GO:0005849; C:mRNA cleavage factor complex; ISS:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:PomBase.
GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.
247Q9USY2    1014   YOW4_SCHPO Uncharacterized RNA-binding protei...2910.0004     46.6     24     42GO:0005688; C:U6 snRNP; ISS:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; ISS:PomBase.
GO:0000244; P:assembly of spliceosomal tri-snRNP; ISS:PomBase.::GO:0000245; P:spliceosomal complex assembly; ISS:PomBase.
248P51990    358   RO22_XENLA Heterogeneous nuclear ribonucleopr...1730.0004     45.8     24     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
249P86049    533   RBM46_MOUSE Probable RNA-binding protein 46 O...2470.0005     46.2     22     37
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
250Q4R2Z0    485   RBM46_MACFA Probable RNA-binding protein 46 O...2470.0005     46.2     22     37
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
251A7VJC2    353   ROA2_RAT Heterogeneous nuclear ribonucleoprot...1750.0005     45.8     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
252Q2HJ60    341   ROA2_BOVIN Heterogeneous nuclear ribonucleopr...1610.0005     45.8     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
253P51968    373   RO31_XENLA Heterogeneous nuclear ribonucleopr...1760.0005     45.8     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
254Q00539    523   NAM8_YEAST Protein NAM8 OS=Saccharomyces cere...860.0006     45.8     33     50GO:0000243; C:commitment complex; IPI:SGD.::GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005685; C:U1 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD.
GO:0003729; F:mRNA binding; IPI:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006376; P:mRNA splice site selection; IMP:SGD.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IMP:SGD.
255Q00438    555   PTBP1_RAT Polypyrimidine tract-binding protei...1990.0006     45.8     25     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004519; F:endonuclease activity; TAS:RGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:RGD.::GO:0003697; F:single-stranded DNA binding; TAS:RGD.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051148; P:negative regulation of muscle cell differentiation; ISS:UniProtKB.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; TAS:RGD.
256Q8JZV4    413   RBM41_MOUSE RNA-binding protein 41 OS=Mus mus...890.0006     45.8     31     52
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
257P53883    403   NOP13_YEAST Nucleolar protein 13 OS=Saccharom...1010.0007     45.4     28     46GO:0005730; C:nucleolus; IDA:SGD.::GO:0030684; C:preribosome; IDA:SGD.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
258O04425    747   FCA_ARATH Flowering time control protein FCA ...1960.0008     45.8     19     41GO:0000785; C:chromatin; TAS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031048; P:chromatin silencing by small RNA; IMP:TAIR.::GO:0009790; P:embryo development; IGI:TAIR.::GO:0009553; P:embryo sac development; IGI:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0009909; P:regulation of flower development; IMP:TAIR.
259Q2T9U5    783   REXON_BOVIN Putative RNA exonuclease NEF-sp O...1650.0008     45.4     22     45
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
260O93235    166   CIRBA_XENLA Cold-inducible RNA-binding protei...760.0009     43.5     28     53GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0019899; F:enzyme binding; ISS:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0070181; F:SSU rRNA binding; ISS:UniProtKB.::GO:0030371; F:translation repressor activity; ISS:UniProtKB.
GO:0016477; P:cell migration; IMP:UniProtKB.::GO:0007369; P:gastrulation; IMP:UniProtKB.::GO:0072004; P:kidney field specification; IMP:UniProtKB.::GO:0048255; P:mRNA stabilization; ISS:UniProtKB.::GO:0060212; P:negative regulation of nuclear-transcribed mRNA poly(A) tail shortening; ISS:UniProtKB.::GO:0022008; P:neurogenesis; IMP:UniProtKB.::GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0048793; P:pronephros development; IMP:UniProtKB.::GO:0009409; P:response to cold; IEP:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0034063; P:stress granule assembly; ISS:UniProtKB.
261Q2R0Q1    574   U2A2A_ORYSJ Splicing factor U2af large subuni...1070.0009     45.4     32     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
262Q8VC70    383   RBMS2_MOUSE RNA-binding motif, single-strande...2000.001     44.7     18     35GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
263Q80YT9    238   RBM11_MOUSE Putative RNA-binding protein 11 O...980.001     44.3     31     47
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
264Q08BH5    510   RBM46_DANRE Probable RNA-binding protein 46 O...2470.001     45.1     21     39
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
265Q5REG1    981   SART3_PONAB Squamous cell carcinoma antigen r...1970.001     45.4     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
266Q15020    963   SART3_HUMAN Squamous cell carcinoma antigen r...1970.001     45.4     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
267Q9SJG8    843   AML2_ARATH Protein MEI2-like 2 OS=Arabidopsis...790.001     45.1     29     53
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0045927; P:positive regulation of growth; IMP:UniProtKB.::GO:0045836; P:positive regulation of meiosis; IMP:UniProtKB.
268O09032    373   ELAV4_RAT ELAV-like protein 4 OS=Rattus norve...890.002     43.9     31     52
GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
269Q61701    385   ELAV4_MOUSE ELAV-like protein 4 OS=Mus muscul...890.002     44.3     31     52
GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
270Q7SZT7    400   ELAV4_XENLA ELAV-like protein 4 OS=Xenopus la...890.002     43.9     31     52GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
271A4QNI8    400   ELAV4_XENTR ELAV-like protein 4 OS=Xenopus tr...890.002     43.9     31     52GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
records
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