Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Agaricus bisporus bisporus H97
Locus:
189584
Length:
563
Number of sequences:
10438
Description:
estExt_fgenesh2_kg.C_10459
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
811Q8IY67    606   RAVR1_HUMAN Ribonucleoprotein PTB-binding 1 O...371.2     35.8     46     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
812Q2KIR1    282   SNRPA_BOVIN U1 small nuclear ribonucleoprotei...791.2     35.4     27     52GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
813Q8VHJ7    1014   PRGC2_MOUSE Peroxisome proliferator-activated...741.2     35.8     26     57GO:0005739; C:mitochondrion; IMP:GOC.
GO:0050682; F:AF-2 domain binding; ISS:UniProtKB.::GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007015; P:actin filament organization; IMP:DFLAT.::GO:0060346; P:bone trabecula formation; IMP:DFLAT.::GO:0034614; P:cellular response to reactive oxygen species; IDA:DFLAT.::GO:0030520; P:intracellular estrogen receptor signaling pathway; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:DFLAT.::GO:0001503; P:ossification; IMP:DFLAT.::GO:0010694; P:positive regulation of alkaline phosphatase activity; IMP:DFLAT.::GO:0045780; P:positive regulation of bone resorption; IMP:DFLAT.::GO:0045672; P:positive regulation of osteoclast differentiation; IMP:DFLAT.::GO:0042327; P:positive regulation of phosphorylation; IMP:DFLAT.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006390; P:transcription from mitochondrial promoter; IMP:DFLAT.
814P29558    406   RBMS1_HUMAN RNA-binding motif, single-strande...1421.2     35.4     20     45GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0003690; F:double-stranded DNA binding; NAS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0003697; F:single-stranded DNA binding; NAS:UniProtKB.
GO:0006260; P:DNA replication; NAS:UniProtKB.::GO:0006396; P:RNA processing; TAS:ProtInc.
815P09012    282   SNRPA_HUMAN U1 small nuclear ribonucleoprotei...791.2     35.4     27     52GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IDA:HGNC.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0017069; F:snRNA binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:HGNC.
816Q10193    275   SRP1_SCHPO Pre-mRNA-splicing factor srp1 OS=S...751.2     35     32     47GO:0005634; C:nucleus; IDA:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0046982; F:protein heterodimerization activity; IPI:PomBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; TAS:PomBase.
817P45429    282   SNRPA_XENLA U1 small nuclear ribonucleoprotei...761.2     35     25     55GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
818P29341    636   PABP1_MOUSE Polyadenylate-binding protein 1 O...531.3     35.4     36     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:2000623; P:negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; ISS:UniProtKB.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
819Q5AI15    629   PABP_CANAL Polyadenylate-binding protein, cyt...821.3     35.8     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
820Q9R0U0    262   SRS10_MOUSE Serine/arginine-rich splicing fac...541.3     35     30     54GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; NAS:UniProtKB.
GO:0016482; P:cytoplasmic transport; IDA:UniProtKB.::GO:0006406; P:mRNA export from nucleus; NAS:UniProtKB.::GO:0006376; P:mRNA splice site selection; ISS:UniProtKB.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:UniProtKB.
821O75494    262   SRS10_HUMAN Serine/arginine-rich splicing fac...541.3     35     30     54GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0050733; F:RS domain binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; NAS:UniProtKB.
GO:0000244; P:assembly of spliceosomal tri-snRNP; NAS:UniProtKB.::GO:0016482; P:cytoplasmic transport; IDA:UniProtKB.::GO:0006406; P:mRNA export from nucleus; NAS:UniProtKB.::GO:0006376; P:mRNA splice site selection; IDA:UniProtKB.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:UniProtKB.
822Q9EPH8    636   PABP1_RAT Polyadenylate-binding protein 1 OS=...531.4     35.4     36     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:2000623; P:negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; ISS:UniProtKB.::GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
823Q9LYN7    907   AML4_ARATH Protein MEI2-like 4 OS=Arabidopsis...751.4     35.8     27     48
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048507; P:meristem development; IGI:TAIR.::GO:0045927; P:positive regulation of growth; IMP:UniProtKB.::GO:0045836; P:positive regulation of meiosis; IMP:UniProtKB.
824A4F5G6    411   RFOX2_XENLA RNA binding protein fox-1 homolog...731.4     35.4     29     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
825Q69KL9    185   RZ21A_ORYSJ Serine/arginine-rich splicing fac...641.5     34.3     31     56
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
826Q98SJ2    360   DAZP1_XENLA DAZ-associated protein 1 OS=Xenop...1031.6     35     21     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:MGI.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.
827P86049    533   RBM46_MOUSE Probable RNA-binding protein 46 O...751.6     35.4     36     48
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
828A6NDY0    278   EPAB2_HUMAN Embryonic polyadenylate-binding p...721.6     35     24     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
829Q8WU68    220   U2AF4_HUMAN Splicing factor U2AF 26 kDa subun...711.6     34.7     30     54GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
830Q4P8R9    651   PABP_USTMA Polyadenylate-binding protein, cyt...781.7     35     26     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
831P49310    166   GRP1_SINAL Glycine-rich RNA-binding protein G...761.7     33.9     34     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
832Q80YR5    991   SAFB2_MOUSE Scaffold attachment factor B2 OS=...941.7     35.4     29     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
833Q76CY5    286   DAZL_XENTR Deleted in azoospermia-like OS=Xen...841.7     34.7     29     51GO:0032019; C:mitochondrial cloud; ISS:UniProtKB.::GO:0045495; C:pole plasm; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008494; F:translation activator activity; ISS:UniProtKB.
GO:0007281; P:germ cell development; ISS:UniProtKB.::GO:0008354; P:germ cell migration; ISS:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0045948; P:positive regulation of translational initiation; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
834Q09702    529   NRD1_SCHPO Negative regulator of differentiat...671.7     35     33     55GO:0005829; C:cytosol; IDA:PomBase.
GO:0003729; F:mRNA binding; TAS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0031138; P:negative regulation of conjugation with cellular fusion; IGI:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
835Q66JB7    380   RFOX2_XENTR RNA binding protein fox-1 homolog...731.7     35     29     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
836A5DM21    631   PABP_PICGU Polyadenylate-binding protein, cyt...861.8     35     27     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
837Q4R2Z0    485   RBM46_MACFA Probable RNA-binding protein 46 O...751.8     35     36     48
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
838A3GGU2    271   EIF3G_PICST Eukaryotic translation initiation...461.8     34.7     37     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
839Q811R2    1010   PRGC2_RAT Peroxisome proliferator-activated r...741.8     35.4     27     57
GO:0050682; F:AF-2 domain binding; ISS:UniProtKB.::GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0030520; P:intracellular estrogen receptor signaling pathway; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0051591; P:response to cAMP; IEP:RGD.::GO:0051384; P:response to glucocorticoid stimulus; IEP:RGD.
840A2VDB3    392   RBM42_XENLA RNA-binding protein 42 OS=Xenopus...721.8     35     25     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
841Q8TBY0    533   RBM46_HUMAN Probable RNA-binding protein 46 O...751.9     35     36     48
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
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