| rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
781 | Q2S1P1 | 712 | PNP_SALRD Polyribonucleotide nucleotidyltrans... | 59 | 3.9 | 35 | 41 | 49 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 782 | Q9PL77 | 693 | PNP_CHLMU Polyribonucleotide nucleotidyltrans... | 84 | 3.9 | 35 | 31 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 783 | Q82K80 | 738 | PNP_STRAW Polyribonucleotide nucleotidyltrans... | 59 | 4 | 35 | 37 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 784 | Q6CJU1 | 469 | DBP5_KLULA ATP-dependent RNA helicase DBP5 OS... | 122 | 4 | 34.7 | 26 | 43 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW. | 785 | Q57840 | 187 | RPOE1_METJA DNA-directed RNA polymerase subun... | 39 | 4.1 | 33.9 | 44 | 67 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro. | | | | | | | | | | | 786 | Q822C1 | 694 | PNP_CHLCV Polyribonucleotide nucleotidyltrans... | 61 | 4.4 | 35 | 34 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 787 | A5CSN9 | 757 | PNP_CLAM3 Polyribonucleotide nucleotidyltrans... | 65 | 4.4 | 35 | 32 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 788 | Q819Z1 | 712 | PNP_BACCR Polyribonucleotide nucleotidyltrans... | 94 | 4.6 | 34.7 | 33 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 789 | B0RGW7 | 757 | PNP_CLAMS Polyribonucleotide nucleotidyltrans... | 65 | 4.6 | 34.7 | 32 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 790 | B1VDC1 | 765 | PNP_CORU7 Polyribonucleotide nucleotidyltrans... | 81 | 4.8 | 34.7 | 30 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 791 | Q9JZ44 | 561 | RS1_NEIMB 30S ribosomal protein S1 OS=Neisser... | 104 | 4.9 | 34.7 | 33 | 49 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 792 | Q8ZT95 | 433 | SRP54_PYRAE Signal recognition particle 54 kD... | 86 | 4.9 | 34.7 | 28 | 53 | GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW. | | | | | | | | | | GO:0008312; F:7S RNA binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro. | | | | | | | | | | GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro. | 793 | Q255L4 | 694 | PNP_CHLFF Polyribonucleotide nucleotidyltrans... | 61 | 5 | 34.7 | 34 | 56 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 794 | P0AG70 | 557 | RS1_SHIFL 30S ribosomal protein S1 OS=Shigell... | 69 | 5.1 | 34.7 | 35 | 46 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 795 | P0AG67 | 557 | RS1_ECOLI 30S ribosomal protein S1 OS=Escheri... | 69 | 5.1 | 34.7 | 35 | 46 | GO:0022627; C:cytosolic small ribosomal subunit; IDA:EcoCyc.::GO:0016020; C:membrane; IDA:UniProtKB. | | | | | | | | | | GO:0003729; F:mRNA binding; IDA:EcoCyc.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:2000766; P:negative regulation of cytoplasmic translation; IEP:EcoCyc.::GO:0006412; P:translation; IMP:EcoCyc. | 796 | P0AG68 | 557 | RS1_ECOL6 30S ribosomal protein S1 OS=Escheri... | 69 | 5.1 | 34.7 | 35 | 46 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 797 | P0AG69 | 557 | RS1_ECO57 30S ribosomal protein S1 OS=Escheri... | 69 | 5.1 | 34.7 | 35 | 46 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 798 | B3CTX1 | 736 | PNP_ORITI Polyribonucleotide nucleotidyltrans... | 76 | 5.1 | 34.7 | 32 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 799 | Q5HP69 | 392 | RS1_STAEQ 30S ribosomal protein S1 OS=Staphyl... | 94 | 5.3 | 34.3 | 38 | 56 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 800 | B0TZ09 | 693 | PNP_FRAP2 Polyribonucleotide nucleotidyltrans... | 72 | 5.4 | 34.7 | 40 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 801 | A5CC62 | 740 | PNP_ORITB Polyribonucleotide nucleotidyltrans... | 76 | 5.5 | 34.7 | 32 | 53 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 802 | B9M1G5 | 696 | PNP_GEOSF Polyribonucleotide nucleotidyltrans... | 73 | 5.9 | 34.3 | 34 | 52 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 803 | A3MWI4 | 338 | RL3_PYRCJ 50S ribosomal protein L3P OS=Pyroba... | 90 | 6.3 | 33.9 | 31 | 47 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 804 | C1CXB5 | 721 | PNP_DEIDV Polyribonucleotide nucleotidyltrans... | 59 | 7.1 | 34.3 | 37 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 805 | Q49X62 | 697 | PNP_STAS1 Polyribonucleotide nucleotidyltrans... | 58 | 7.3 | 34.3 | 38 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 806 | Q8DWB2 | 730 | PNP_STRMU Polyribonucleotide nucleotidyltrans... | 49 | 7.4 | 34.3 | 41 | 59 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 807 | O84100 | 569 | RS1_CHLTR 30S ribosomal protein S1 OS=Chlamyd... | 85 | 8 | 33.9 | 35 | 53 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 808 | Q9HZ71 | 559 | RS1_PSEAE 30S ribosomal protein S1 OS=12228).... | 70 | 8.2 | 33.9 | 33 | 47 | GO:0005840; C:ribosome; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro. | | | | | | | | | | GO:0006412; P:translation; IEA:InterPro. | 809 | Q65JH5 | 705 | PNP_BACLD Polyribonucleotide nucleotidyltrans... | 74 | 8.6 | 33.9 | 36 | 57 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 810 | A9B8G1 | 777 | PNP_HERA2 Polyribonucleotide nucleotidyltrans... | 101 | 8.8 | 33.9 | 34 | 54 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro. | 811 | Q62780 | 1032 | DDX46_RAT Probable ATP-dependent RNA helicase... | 374 | 9 | 33.9 | 24 | 39 | GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |
